Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4372 |
Symbol | alaS |
ID | 6412056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4698982 |
End bp | 4701651 |
Gene Length | 2670 bp |
Protein Length | 889 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642714254 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_001993343 |
Protein GI | 192292738 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGCG TTAACGAAAT TCGGTCTACG TTTCTGAACT ACTTCGCCAA GAACGGCCAC GAGATCGTGT CGTCGTCGCC GCTGGTGCCG CGCAACGACC CGACTTTGAT GTTCACCAAT GCCGGCATGG TGCAGTTCAA GAACGTGTTC ACCGGGCTGG AGAAGCGCTC CTATCAGCGC GCCACCACCT CGCAGAAATG CGTGCGCGCC GGCGGCAAGC ACAACGACCT CGACAACGTC GGCTACACCG CGCGGCATCT CACTTTCTTC GAGATGCTCG GCAACTTCTC GTTCGGCGAT TACTTCAAGG AACGCGCGAT CGAGCTCGCC TGGAATCTGA TCACCCGCGA CTTCGGCCTG AAGAAGGACA AGCTGCTGGT CACCGTCTAT CACACCGACG ACGAGGCGGC CGGCTACTGG AAGAAGATCG CCGGCTTCTC CGACGACCGC ATCATCCGCA TTCCGACGTC CGACAACTTC TGGGCGATGG GCGACACCGG CCCGTGCGGT CCGTGCTCCG AGATCTTCAT CGATCGCGGC GAGCACATTT TCGGCGGACC GCCCGGCTCG CCGGACGAGG ACGGCGACCG CTTCCTGGAG TTCTGGAATC TGGTGTTCAT GCAGTACGAC CAGGTGACGA AGGACGAACG CGTGCCGCTG CCGCGTCCGT CGATCGACAC CGGCATGGGC CTGGAGCGGA TGGCCTCCAT CCTCCAGGGC GTCGACAGCG TGTTTGACAC CGACCTGTTC CGCAGCCTGA TCGACGCGAC TTCGTCGGCG CTTGGCCGTG GCCCGACCGA ACAGGACGCC GCCTCGTTCC GCGTCATCGC CGACCACCTG CGCTCGTCGT CGTTCCTGAT CGCCGACGGC GTGCTGCCGT CGAATGAAGG CCGCGGCTAT GTGCTGCGTC GGATCATGCG CCGCGCAATG CGCCACGCCC AGTTGCTCGG CGCCAGCGAG CCGCTGATGT GGCGCCTGGT GTGGGCGCTG GTGCGCGAGA TGGGCCAGGC CTATCCGGAG CTGGTGCGCG CCGAGGCGAT GATCGAAGAG ACGATGCGGC TCGAAGAGAC CCGCTTTCGC AAGACGCTCG ATCGCGGCCT TGCGATCCTC GACGAGAAGA GCGCCGGCCT GAAGAAGGGC GACATGTTCG ACGGCGAGAC CGCGTTCACG CTGTACGATA CCTATGGCTT CCCGCTCGAT CTGACCCAGG ACGCGCTGCG CAACCGCGGC ATCAATGTCG ATATCGCCTC GTTCACCGAC GCGATGGATC GGCAGCGCGC CAAGGCTCGC GCCTCGTGGG CGGGCTCGGG CGAAGCCGCG ACCGAGGCGG TGTGGTTCTC GCTGCGTGAG AAGCTCGGCG CCACTGAGTT CCTCGGCTAC GACACCGAGA CCGCCGAAGG CGTCGTCACC GCGCTGGTCA AGGACGGCGC TGAAGTTGAC GCGCTGAAGG CCGGCGAGAG CGGTGCGATC ATCGTCAACC AGACGCCGTT CTACGCCGAG TCCGGCGGTC AGGTCGGCGA CACCGGCGTG CTCACTGCCG ATGGCGTGCG CTTCGTCGTC ACCGACACGA TGAAGAAGGC CGGTGATCTG TTCGTGCATT TCGGCACGGT CGAGCAGGGC AGCATCAAGC TCGGCGACGC GTTGGCGCTC GACGTCGATC ACGCCCGGCG TTCGGCGATC CGCGCCAATC ACTCGGCGAC ACATCTGCTG CACGAGGCGC TGCGCCAGGT GCTCGGCGAT CACATTGCGC AGAAGGGCTC GCTGGTCGCG CCCGACCGTC TGCGCTTCGA CTTCGTGCAT CAGAAGCCGA TCACTCAGGA CGAACTGCGC AAGGTCGAGG ACATCGCCAA CGACATCGTG TTGGAAAACG ACGAGGTCGT GACCCGGCTG ATGGCGGTCG ACGATGCGCG CGAAGCCGGC GCCCGCGCGC TGTTCGGCGA GAAGTACGGC GACGAAGTCC GTGTGGTCTC GATGGGCAAG GCGGCGCGCG ATCACGGCTC CAACGTGTTC GGCTGGTCGG TCGAACTGTG CGGCGGCACC CACGTCAAGC GCACTGGCGA CATCGGCCTA GTGTCGATCA CGGGTGAAAG CGCGGTCGCG GCCGGCGTTC GTCGTATCGA GGCGCTGACC GGGCGCGCGG CACGGCACAA CGCCAATGCG GCGATCAGCA CCGCGAAGCT CGCTGCCTCC GAACTGCGGA CCACGCTGGA CGACATGCCG GCGCGGATCA CCGCGCTGAT GGACGAGCGC AAGAAGCTCG AGCGTGAACT GTCCGAGGCG CGCAAGAAGC TGGCGATGGG CGGCAGTGCG TCCGGTGACG GCGCCGCATC CGACGTCCGC GACATCGGTG GCATCAAGCT GATGGCGCGT GCGGTCGAAG GCATCGAGAT CAAGGATCTC AAGGGCCTGG TCGACCAGGG CAAGAAGCAG CTCGGCTCCG GCGTGATCGC GCTGGTGGCG ACCAGCGAAG ACGGCAAGGG CTCGATCGTG GTCGGCGTCA CGCCCGACCT GGTGTCGCGG TTCTCCGCCG TCGATCTGGT CCGCAAGGCG TCCGAAGTGC TCGGCGGCAA GGGCGGCGGC GGCAAGCCCG ACATGGCGCA GGCCGGCGGT CCCGACGGCT CCAAGGCCGG CGCCGCGCTG GAAGCGATCG CGGCAGCCAT CGGCGGCTGA
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Protein sequence | MSGVNEIRST FLNYFAKNGH EIVSSSPLVP RNDPTLMFTN AGMVQFKNVF TGLEKRSYQR ATTSQKCVRA GGKHNDLDNV GYTARHLTFF EMLGNFSFGD YFKERAIELA WNLITRDFGL KKDKLLVTVY HTDDEAAGYW KKIAGFSDDR IIRIPTSDNF WAMGDTGPCG PCSEIFIDRG EHIFGGPPGS PDEDGDRFLE FWNLVFMQYD QVTKDERVPL PRPSIDTGMG LERMASILQG VDSVFDTDLF RSLIDATSSA LGRGPTEQDA ASFRVIADHL RSSSFLIADG VLPSNEGRGY VLRRIMRRAM RHAQLLGASE PLMWRLVWAL VREMGQAYPE LVRAEAMIEE TMRLEETRFR KTLDRGLAIL DEKSAGLKKG DMFDGETAFT LYDTYGFPLD LTQDALRNRG INVDIASFTD AMDRQRAKAR ASWAGSGEAA TEAVWFSLRE KLGATEFLGY DTETAEGVVT ALVKDGAEVD ALKAGESGAI IVNQTPFYAE SGGQVGDTGV LTADGVRFVV TDTMKKAGDL FVHFGTVEQG SIKLGDALAL DVDHARRSAI RANHSATHLL HEALRQVLGD HIAQKGSLVA PDRLRFDFVH QKPITQDELR KVEDIANDIV LENDEVVTRL MAVDDAREAG ARALFGEKYG DEVRVVSMGK AARDHGSNVF GWSVELCGGT HVKRTGDIGL VSITGESAVA AGVRRIEALT GRAARHNANA AISTAKLAAS ELRTTLDDMP ARITALMDER KKLERELSEA RKKLAMGGSA SGDGAASDVR DIGGIKLMAR AVEGIEIKDL KGLVDQGKKQ LGSGVIALVA TSEDGKGSIV VGVTPDLVSR FSAVDLVRKA SEVLGGKGGG GKPDMAQAGG PDGSKAGAAL EAIAAAIGG
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