| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4362 |
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| Symbol | |
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| ID | 6412046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4685404 |
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| End bp | 4686627 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642714244 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_001993333 |
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| Protein GI | 192292728 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.630057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAAA TCAAGGTGAA GAACCCCGTC GTGGAACTCG ACGGTGACGA GATGACCCGT
ATCATCTGGC AGATGATCAA GGACAAGCTC ATCACCCCGT TCCTTGATGT CGAGTTGATG
TATTTCGACC TGGGGATGGA GCACCGCGAC GCGACCGACG ACCAGGTCAC CATCGATGCG
GCGAACGCGA TCAAGCAGGT CGGCGTCGGC GTGAAGTGCG CCACCATCAC CCCGGACGAA
GCGCGGGTGA AGGAGTTCGG CCTCAAGAGC ATGTGGAAGT CGCCGAACGG CACCATCCGC
AACATCCTCG GCGGCGTGAT CTTCCGCGAA CCGATTATCT GCAACAACGT GCCGCGGCTG
GTGCCGGGCT GGACCAAGCC GATCGTGATC GGCCGTCACG CCTACGGCGA TCAGTATCGC
GCGACCGATA TCAAGTTCCC CGGCCCGGGC ACGCTGACGA TGAAGTTCGT CGGCGAAGAC
GGCTCGGTGA TCGAGCGTGA AGTGTTCAAG GCGCCCGGCG CCGGCGTGGC GATGTCGATG
TACAACCTCG ACGAGTCGAT CAAGGACTTC GCGCGCGCGT CGCTGAACTA CGGCCTGATC
CGCAACTATC CGGTCTATCT GTCGACCAAG AACACCATCA TGAAGGTGTA CGACGGTCGC
TTCAAAGACA TCTTCCAGGA GATCTTCGAG AACGAGTTCA AGGCCGAGTA CGACGCCAAG
GGCCTGACCT ACGAGCATCG CCTGATCGAC GACATGGTCG CATCGGCGCT GAAGTGGTCG
GGCGGCTACG TCTGGGCCTG TAAGAACTAC GACGGCGACG TGCAGTCCGA CACCGTGGCG
CAGGGCTACG GCTCGCTCGG CCTGATGACC TCGGTGCTGA TGACGCCGGA CGGCAAGACG
GTGGAAGCCG AAGCCGCGCA CGGCACCGTC ACCCGCCACT ATCGCGAGCA CCAGAAGGGC
AAGGCGACCT CGACCAACTC GATCGCCTCG ATCTTCGCCT GGACCCGCGG CTTGGCGCAT
CGCGCCAAGC TCGACTCCAA CGAAGAACTC GCCCGCTTCG CCGACACGCT GGAGAAGGTC
TGCGTCGAGA CCGTCGAAGC CGGCGCGATG ACGAAAGACC TCGCGCTGCT GGTCGGCGCC
GACCAGCGCT GGCTGTCGAC CGAGGGCTTC CTCGATAAGG TCGCACAGAA CCTGCACAAG
GCGATGGACA CCAAGGCCGC CTGA
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| Protein sequence | MAKIKVKNPV VELDGDEMTR IIWQMIKDKL ITPFLDVELM YFDLGMEHRD ATDDQVTIDA
ANAIKQVGVG VKCATITPDE ARVKEFGLKS MWKSPNGTIR NILGGVIFRE PIICNNVPRL
VPGWTKPIVI GRHAYGDQYR ATDIKFPGPG TLTMKFVGED GSVIEREVFK APGAGVAMSM
YNLDESIKDF ARASLNYGLI RNYPVYLSTK NTIMKVYDGR FKDIFQEIFE NEFKAEYDAK
GLTYEHRLID DMVASALKWS GGYVWACKNY DGDVQSDTVA QGYGSLGLMT SVLMTPDGKT
VEAEAAHGTV TRHYREHQKG KATSTNSIAS IFAWTRGLAH RAKLDSNEEL ARFADTLEKV
CVETVEAGAM TKDLALLVGA DQRWLSTEGF LDKVAQNLHK AMDTKAA
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