| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4361 |
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| Symbol | |
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| ID | 6412045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4683814 |
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| End bp | 4685013 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642714243 |
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| Product | RNA methyltransferase, TrmH family, group 1 |
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| Protein accession | YP_001993332 |
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| Protein GI | 192292727 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[S] Function unknown |
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| COG ID | [COG0565] rRNA methylase
[COG2852] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.989023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGGCT CCGGCACCGA CCGATCCAAG CCCCCGGCCG CGCTCGACGG CCCGGTGGTG
ATTCTGGTCG AGCCCCAACT GGGCGAGAAC ATCGGGATGT GCGCGCGCGC AATGGGCAAT
TTCGGGCTGA CCCGGCTGCG GCTGGTGAAG CCGCGCGACG GCTGGCCGAA CGTCGCCGCC
CAGCGCTCGG CCGCCGGCGC CGACCACATC CTGAACGCGG TCGAACTGTT CGACAGCGTC
GCCGAGGCGG TGAAGGACTG TACGCTGCTG TTCGCCACCA CCGCGCGCGC CCACGACCAG
GCCAAGCCGG TGCGCGGGCC GGAAGCTGCC GCGCAGGAGA TCGTCGCCGA GACCGCCTCC
GGCGGGACCA CCGGCATCAT GTTCGGCCGC GAGCGCCACG GGCTGGAGAA CGACGAGGTC
GCGCTCGCCA ACCGCATCGT CACCTTCCCG GTCAATCCGG CGTTCGCCTC GCTGAACCTG
GCGCAAGCGG TGCTGCTGAT GGGCTATGAG TGGTTCAAGC ACGCCACGCA GAATGCACTG
CCTTACGAGA TGCCCGAGCG CAGCCCGCGG GCCTCGCAGC ATCAGATCGA CGCGTTCTTC
TCCAATCTGG TGGCCGAGCT CGACCGCGTC GAATTCCTCC GCCCGCCGGA GAAGCGCGAC
ACCATGCTGG TGAACCTGCG CAACATCTTC ACCCGGATGG AGCCGAGCAA GCAGGACATG
CACACGCTGC ACGGCGTGGT GATGGCGATC GCCGACGGCC GCAAGGGCCC GGCCAAGGGC
GGTGTACTCG ACGGCGATCA GGCCACGCGT CTGCGCGCGC TGCTGGCGGA GCGCGCAGCC
GCCGGCGGCC CCGACGCCGA AGGCGGCTCG CTGCGCGGGC TCGCCCGCAT GCTCCGCCGC
AACCCGACCG ACGCCGAGCG GCTGCTGTGG GAGCATCTGC GCAAGGACCG CCGCTTCGCC
GGCAACTTCA AGCGCCAGAC CCCGGTCGGC CGCCACATCC CGGATTTCGT CTCCTTCACC
CGCCGCGTCG CGATCGAGCT GGTCAATCCG GATGAGAGCG ACGCGATCGT CCGCGACCGG
GCGATGCGCA AGGCGTGGCT GGAAGCGCGC GACTATCGCG TCGCGCTGGT CGCAGCGACC
GACGTCACCA GCGACATCGC CGCCGTGCTG GCGCGGCTGG AAGCGGTGCT GGCGGCGTAG
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| Protein sequence | MSGSGTDRSK PPAALDGPVV ILVEPQLGEN IGMCARAMGN FGLTRLRLVK PRDGWPNVAA
QRSAAGADHI LNAVELFDSV AEAVKDCTLL FATTARAHDQ AKPVRGPEAA AQEIVAETAS
GGTTGIMFGR ERHGLENDEV ALANRIVTFP VNPAFASLNL AQAVLLMGYE WFKHATQNAL
PYEMPERSPR ASQHQIDAFF SNLVAELDRV EFLRPPEKRD TMLVNLRNIF TRMEPSKQDM
HTLHGVVMAI ADGRKGPAKG GVLDGDQATR LRALLAERAA AGGPDAEGGS LRGLARMLRR
NPTDAERLLW EHLRKDRRFA GNFKRQTPVG RHIPDFVSFT RRVAIELVNP DESDAIVRDR
AMRKAWLEAR DYRVALVAAT DVTSDIAAVL ARLEAVLAA
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