| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4360 |
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| Symbol | |
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| ID | 6412044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4682617 |
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| End bp | 4683633 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714242 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001993331 |
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| Protein GI | 192292726 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGATC GTGGACACGA CGGACCCGGG CAGCCGCACC CGTCCGAGCC GCTGTGCCAG
GTGACCTTGT GCGAGTGCCT CAACGAAAAC GCGCTGCTCG CCAAATATGC GATCGACCGG
ATCGCCGACA TGATCATCTG GCTCGACGAG CATGGGCGGG TGATGTTCGT CAACGCGGCC
GCGACCAAGC TGCTCGGCTA CTCGCAGGCC GAGTTCCTGT CGATGACGGT GCTGGATCTC
GATCCGCTGT TCGACGCCGA CATCTGGCGC GACCATTGGC GCGAGGTCGA GTCCCGCGGC
TCGTTCACGC TCGAAACCGT CAACCGCACC AAGGACGGCG TCGACGTTGC GGTCGAGGTG
ACGGTCAATT TCGTCGAGTG TCTGGGCCGC AAGATGAACT GCTCGATCGT TCGCGACATC
ACCGAACGCA AGCGGGCCGC CGAACAGCTT GCGGAGATGC ACCGCAAACT GGTGCAGGCC
AATCTCACCG ACGAGTTGAC GGCGATCGCA AACCGACGGC GTTTCGACGG TGTGCTCTCG
ACCAGCTACG CCACGCACAT GCGGTCCGGC GCCCCGCTGT CGCTGATCCT GCTCGACATC
GACCACTTCA AGGCCTTCAA CGACCGCTAC GGGCATCTGG AGGGCGATCG ATGCCTGCAG
CGCATCGCGG AAGTGATCGA CAGGCGGATG TTCAGGGCCG CCGATCTGGC GGCGCGCTGG
GGCGGCGAGG AGTTCGTCTG CATCCTGCCG GACACCGATG AGGCCGGCGC GCTGGCGGTC
GCGACGGCCC TTCGCGAGGC GATCCTCGAC CTGGCAATCC CGCACGAAGC GTCGCCGATC
GCGCGAGTCG TCACCGCGAG CCTCGGCGTC GTTACCGCGA CGTGCGTGCC CGACAAGACG
GCGCACAGTC TGTTCGAGAC GGCGGATGCG TTGCTTTACG AGGCGAAGAA CCTGGGACGA
AACCGCATCG TCCGATCTCC CTCGCGCGCG GCTAGCGGGG CGATCCGCCC GGATTGA
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| Protein sequence | MPDRGHDGPG QPHPSEPLCQ VTLCECLNEN ALLAKYAIDR IADMIIWLDE HGRVMFVNAA
ATKLLGYSQA EFLSMTVLDL DPLFDADIWR DHWREVESRG SFTLETVNRT KDGVDVAVEV
TVNFVECLGR KMNCSIVRDI TERKRAAEQL AEMHRKLVQA NLTDELTAIA NRRRFDGVLS
TSYATHMRSG APLSLILLDI DHFKAFNDRY GHLEGDRCLQ RIAEVIDRRM FRAADLAARW
GGEEFVCILP DTDEAGALAV ATALREAILD LAIPHEASPI ARVVTASLGV VTATCVPDKT
AHSLFETADA LLYEAKNLGR NRIVRSPSRA ASGAIRPD
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