| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4344 |
|---|
| Symbol | |
|---|
| ID | 6412028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 4671707 |
|---|
| End bp | 4672408 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642714226 |
|---|
| Product | phosphoribosylformylglycinamidine synthase I |
|---|
| Protein accession | YP_001993315 |
|---|
| Protein GI | 192292710 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain |
|---|
| TIGRFAM ID | [TIGR01737] phosphoribosylformylglycinamidine synthase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.083383 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCCG CCGTCCTCGT CTTCCCCGGC ATCAATCGCG AGCGCGACAT GGCGCGCGCG
CTGAAACTCG TCTCCGGCAA CGATGCCGCC ATGGTGTGGC ACGCCGAAAC CGAGCTGCCG
AAGGGTACCG ACCTCGTCGT CGTGCCCGGC GGCTTTTCCT ATGGCGATTA CTTGCGCTGC
GGCGCGATCG CGGCGCGGGC GCCGGTGATG GACGCGGTGC GCAAGTTCGC CGCCGATGGC
GGCCTGGTGC TCGGCGTCTG CAACGGCTTC CAGATCCTGT GCGAGTCCGG CCTGCTGCCG
GGCGTCCTGA TGCGCAACGC GCGGCTGAAG TTCATCTGCC GCGACGTGCA TCTGCGCGTC
GAGCGCAACG ACACCCCGTT CACCCAGGGT TACAAGGCCG GGCAGGTGAT CAAGGTGCCG
GTGGCGCACG GCGAAGGCAA CTACGAAGCC GACGAAGACA CCGTGAAGCG GCTCGAAGGC
GACGGCCGGG TGCTGTATCG CTACTGCTCG CCGGAAGGCG AAGTCGGCGA GCGCCACAAC
ATCAACGGCG CCGCCGCTTC GATCGCCGGC ATCGTCTCCG AGCGCGGCAA CGTGCTCGGC
ATGATGCCGC ATCCGGAAAA CCACGTCGAA GACATCATGG GCTGCACCGA CGGCCGCGGC
CTGTTCGCCG GCCTCGCCCA GCACCTCGCC AAGGCCGCTT GA
|
|---|
| Protein sequence | MKSAVLVFPG INRERDMARA LKLVSGNDAA MVWHAETELP KGTDLVVVPG GFSYGDYLRC
GAIAARAPVM DAVRKFAADG GLVLGVCNGF QILCESGLLP GVLMRNARLK FICRDVHLRV
ERNDTPFTQG YKAGQVIKVP VAHGEGNYEA DEDTVKRLEG DGRVLYRYCS PEGEVGERHN
INGAAASIAG IVSERGNVLG MMPHPENHVE DIMGCTDGRG LFAGLAQHLA KAA
|
|---|
| |