| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4338 |
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| Symbol | |
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| ID | 6412022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4664819 |
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| End bp | 4665823 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642714220 |
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| Product | peptidase S58 DmpA |
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| Protein accession | YP_001993309 |
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| Protein GI | 192292704 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3191] L-aminopeptidase/D-esterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.105129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCACAATC TCATCACCGA TGTCGCCGGC GTCCGCGTCG GCCATGCGCA CGACCACAAG
CTCGCTTCCG GCGTTACCGC GATCCTGTTC GACAAGCCCG CGGTCGCTTC GATCGACGTG
CGCGGTGGCG GTCCTGGGAT TCGCGACGGC GCGCTGCTGG AACCGGTGAA CACCGTCGAG
CAGATCGACG GCTTCACGCT GTCGGGCGGC TCGGCATTCG GCCTCGATTC CGGCGGCGGC
GTGCAGGCCT GGCTCGCCGA GCGCGGTCGC GGTTTTGCGA TCGGCAATGC GACGATTCCG
ATCGTGCCGG GCGCGGTGGT GTTCGACATG ATCAACGGCG GCGACAAGGC CTGGGGTCGG
TTCTCGCCGT ATCGCGACCT CGGCTACGCG GCTGCGGACG CCGCCGGCGA CAGCTTCGCG
CTCGGCAGTG TCGGCGCCGG CCTCGGCGCC ACCACGGCAA CGCTGAAGGG CGGGCTGGGC
TCGGCGTCAG CAACCACGCC CGGCGGCGTC ACGGTGGGCG CCATCGCGGT GGTCAACGCG
ATCGGCAGCG CCACGATCGG CGACGGCCCG TGGTTCTGGT CGGCACCGTT CGAACAGGAC
GGCGAATTCG GCGGGCTCGG GATGCCGGAA AGCTTCACGC CGGACATGCT GAAGGTGCGA
CTGAAGGGCG CGGCGGCAGC GAGCGCGATC GAGAACACCA CGCTGGTCGC GGTGGTGACC
GACGCGAACC TCACCAAGCC GCAGGTGAAG CGGCTGGCGA TGCTGGCGCA GACCGGGTTC
GCCCGCGCGA TCTATCCGGT GCACGCGCCG CTCGATGGCG ACGTGGTGTT TGCCGCGGCG
ACCGGCGTCA AACCGGTCGA GCCGCTCGCA GGTCTCACCG AGCTCGGCAC CATCGCGGCC
AACACGGTGG CGCGGGCAAT CGCTCGCGGC GTCTATGAGG CCACCGCGCT GCCGTTCAAG
GACGCGCAGC CGGCGTGGCG CGATCGGTTC GGCTCGAAGC GATAA
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| Protein sequence | MHNLITDVAG VRVGHAHDHK LASGVTAILF DKPAVASIDV RGGGPGIRDG ALLEPVNTVE
QIDGFTLSGG SAFGLDSGGG VQAWLAERGR GFAIGNATIP IVPGAVVFDM INGGDKAWGR
FSPYRDLGYA AADAAGDSFA LGSVGAGLGA TTATLKGGLG SASATTPGGV TVGAIAVVNA
IGSATIGDGP WFWSAPFEQD GEFGGLGMPE SFTPDMLKVR LKGAAAASAI ENTTLVAVVT
DANLTKPQVK RLAMLAQTGF ARAIYPVHAP LDGDVVFAAA TGVKPVEPLA GLTELGTIAA
NTVARAIARG VYEATALPFK DAQPAWRDRF GSKR
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