| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4334 |
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| Symbol | |
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| ID | 6412018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4660787 |
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| End bp | 4661893 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642714216 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_001993305 |
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| Protein GI | 192292700 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0248694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTCA AGCTTCTCGG TTTGGCATTC GGCGTCTCGC TGGCGCTCTC GACTACGGCG
CTGGCGCAGG ACATCAAGGT CTCGGTCGCC GGTCCGATGA CCGGCGGCGA ATCCGCGTTT
GGCCGGCAGC TCAAGAACGG CGCTGAACAG GCGGTGGTCG ACCTCAACGC CAAGGGTGGC
CTGCTCGGCA AGAAGCTGGT GCTCGACGTC GAGGACGATG CCTGCGATCC GAAGCAGGCG
CGCTCGGTCG CCGAGAAGAT CGCGGGCGAC GGCATCCCGT TCGTCGCCGG TCACTTCTGC
TCGTCATCGT CGATCCCGGC GTCGGAAGCC TACGCCGACG GCAACGTGCT GCAGATCACG
CCGGCCTCGA CCAACCCGCT GTTCACCGAG CGCAAGCTGT GGAACGTGCT GCGCGTCTGC
GGCCGCGACG ATCAGCAGGG CCTGGTCGCC GCCGAGTACA TCCTTAAGAA CTACAAGGGC
AAGAACGTCG CCATCCTCAA CGACAAGACC ACTTACGGCA AGGGTCTGGC CGACGAGACC
AAGAAGGCGC TGAACAAGGC CGGCTTCCAG GAGAAGATGT TCGAGTCCTA CAACAAGGGC
GACAACGACT TTAACTCGAT CGTGTCGCGG CTGAAGCGCG ACGCCATCGA TCTGGTGTAC
ATCGGCGGTT ATCACCGCGA GGCCGGCCTG ATCCTGCGCC AGATGCGCGA CCAGGGCCTC
AGCACCGTGA TGATGGCTGG CGACGCGATG AACGACAAGG AATTCGCCTC GATCACCGGT
CCGCTGGCCG CAGGCACGCT GTTCACCTTC GGCCCCGACC CGCGCAACAA GCCGACCGCC
AAGCAGATCG TCGAAACCTT CAAGGGCAAG GGCATCGATC CGGAAGGCTA CACCCTCTAC
ACCTACGCGG CGTTCCAAGT GTGGTCGCAG GCGGTCGAGA AGGCGAAGTC GACCGACCCG
AAGAAGGTGA TCGAGACCAT CAAGGCCGGC GACTGGGACA CCGTGCTCGG CAAGATGGCG
TTCGACGCCA AGGGCGACAT CAAGGCGATC GACTACGTCG TCTACAAATG GGACGCCAAG
GGCGGCTACG CCGAGATCAA TCCTTAA
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| Protein sequence | MTLKLLGLAF GVSLALSTTA LAQDIKVSVA GPMTGGESAF GRQLKNGAEQ AVVDLNAKGG
LLGKKLVLDV EDDACDPKQA RSVAEKIAGD GIPFVAGHFC SSSSIPASEA YADGNVLQIT
PASTNPLFTE RKLWNVLRVC GRDDQQGLVA AEYILKNYKG KNVAILNDKT TYGKGLADET
KKALNKAGFQ EKMFESYNKG DNDFNSIVSR LKRDAIDLVY IGGYHREAGL ILRQMRDQGL
STVMMAGDAM NDKEFASITG PLAAGTLFTF GPDPRNKPTA KQIVETFKGK GIDPEGYTLY
TYAAFQVWSQ AVEKAKSTDP KKVIETIKAG DWDTVLGKMA FDAKGDIKAI DYVVYKWDAK
GGYAEINP
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