| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4314 |
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| Symbol | |
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| ID | 6411998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4643731 |
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| End bp | 4644870 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714196 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001993285 |
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| Protein GI | 192292680 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGATC AGTTCCCCGC CGACAACGAC CGCCGAGCCT CCGATGCGCA GGACTCCGAG
CATCCGATGC GTGGCGCCGG TGCGCGGCGG CGTTTCCTGA TCGGGACACT GCTCGTCAAC
ATCGCCGCCC TCACGATCGA CGTTTTCGCA TTAGACCCGC AGCATCTGTC GCTGGCCCTC
GGCCTCCGTC TGCTGGTGGT GACGCCGCTG GTGCTGCTTG CGCTCGCGCT CAATCGTCGG
CCTGCTGATC GGCCGTTACA GACGGCCGCT CAGGCCACCG CGGTCGTGGC CTTCGCGCTG
TCGGTGACGG CGATCGGGCA GTTCGCGCCG GAGCCGTTCG CCGGGCGCTA CATGATGGCG
GCGCTGTTCG TGATTTTCGC CGGCACGCTG GTGTCGGCAC TGCCGTGGCG CGCGACCAGG
ATCATGACCA TCGCGGCGGC GGCGCTCTAC ACTCTGATCG TCGTCTCCGG TCTGCGGTGG
CCGCCGGCCT GGTCCAATAT CGATCTGGTC GGGCTGTGCC TCGTCACCTG TGTGATCGCG
TTGCGCGCCA GGCAACGCAA GGACGCGCAG ATCGCCGAAC TGCAACAGAT CCGCCGCCGC
GACGCACTGC TGAAGCAGGA ACTCCGCCAG GCCAACGCCG CACTCGGAAG GCTCTCGACG
ACGGACCCGC TGACCGGCGT ATTCAACCGC CGCTATCTGG ACGAGCTGAT CGAGCAGGAG
ACAGCCTCGC TCGTGCCGTC GCTGGGGCAA AGCGTCCTGA TGATCGACGT CGATCACTTC
AAGTTGTTCA ACGATCACGG CGGTCACGCC GCCGGCGACA GCTGCCTGCA GCAGATCGTC
ACCGCCGTTC GCCGCAACCT CCGCTCCTGC GACGTGGTGG TGCGCTATGG CGGCGAGGAA
TTCGCCGTGG TGCTGCCCGG GCTCGATGAG GCCGAGTTGC GCGAGACGGC GGAGCGGCTG
TGTCATGCAG TCAGCGACCT GCAGATCCCG CATCCCGGTC TTGGCCAGGG GCGTGTCGTG
ACGATCAGCG TCGGCATCGC GCCCCCTGTA CCGGCCGAAA CGCTGGCGGA TGCGATTCAG
CGCGCCGACC AATCCCTGTA TCGCGCCAAA CGCGCCGGCC GGAACCGCGT CAGCGCCTGA
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| Protein sequence | MTDQFPADND RRASDAQDSE HPMRGAGARR RFLIGTLLVN IAALTIDVFA LDPQHLSLAL
GLRLLVVTPL VLLALALNRR PADRPLQTAA QATAVVAFAL SVTAIGQFAP EPFAGRYMMA
ALFVIFAGTL VSALPWRATR IMTIAAAALY TLIVVSGLRW PPAWSNIDLV GLCLVTCVIA
LRARQRKDAQ IAELQQIRRR DALLKQELRQ ANAALGRLST TDPLTGVFNR RYLDELIEQE
TASLVPSLGQ SVLMIDVDHF KLFNDHGGHA AGDSCLQQIV TAVRRNLRSC DVVVRYGGEE
FAVVLPGLDE AELRETAERL CHAVSDLQIP HPGLGQGRVV TISVGIAPPV PAETLADAIQ
RADQSLYRAK RAGRNRVSA
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