| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4295 |
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| Symbol | |
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| ID | 6411979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4620583 |
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| End bp | 4621836 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642714177 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001993266 |
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| Protein GI | 192292661 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000269255 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGGA ACGAGACCGA TGTCGTGGTG CTCGGCGCGG GCATCGTCGG TGTCTGCGCA
GCCCTGCACT TGCAGCGCCG CGGCCGGGAT GTGGTTTTGG TCGACCGCAA CGGCACGGCA
GGTGACGAGA CCAGCTACGG CAATGCCGGG CTGATCGAAT GCGCCTCGGT GTTTCCCTAT
ATGTTTCCGC GCGATCCCGG CCATCTGCTG CGCTACGCGC TGAACGGTTC GGCCGACGCG
CACTATCAGC TCTCCGGCAT TCCCGAATTC CTGCCCTGGC TGGTGCGGTA TTTCCTCGCC
TCATCGCCGC GCCGCGCGGC GCAGACCGCG CAGGCCGCGT TGCCGTTGAT CCGGCGCAGC
CTCGCCGAGC ACGAGGCGCT GATCGCGGAC GCCGGCGTGC CCGAGCTGCT GCGCAAGACC
GGCTGGATCA AGCTGTTTCG TTCGCCGAAA AGCTTTGCCA AGGCGCTCGG CGATCTCGAG
CGGGCGCGGC AGTTCGGCGT CGTCGCCGAC GTGCTCGATC GTGCCGGAAT CGCTGAACGC
GAGCCGAACC TGACCGGCGA TTTTGCCGGG GCGATCCACT GGCTCGAGCC CGGCTCGATT
CCTGATCCGG GCGGCCTGGT CAAAGCCTAC GCGGCGTTGT TCTCCCGGCG CGGCGGCCGC
TTCGTCAAAG GCGACGCGCG CACGCTGCAG CAGGAAGAGG GCGGCTGGCG GGTTGCGACC
GAGCTTGGAG TCGTCACCGC ACGCGAAGCG GTGGTGGCGA TGGGGCCGTG GTCGGACCTG
GTGTTCAAGC CGCTCGGCTA TCGCTTCCCG CTCGGCGTCA AGCGCGGCTA CCACGTCCAT
CTGACGCCGC GCGGCAATGC CAGTCTGCAG CACGCGGTGC TCGACGCCGA TCGCGGCTAT
CTGCTGGCGC CGATGAATCG CGGCATTCGC CTCACGACTG GCGCCGAGTT CGCGCGACGC
GATGCGCCGC CGTCGCCGGT GCAGATCGCG CAGACGCTGC CGGTGGCGCG CGCGCTGTTC
CCGCTCGGCG ACACCATCGA GCCGCAGCCG TGGATGGGCG CGCGGCCGTG CCTGCCGGAC
ATGCTGCCGC TGATCGGTCG CGCGCCGCGC CATCCCGGCC TGTGGTTCGA TTTCGGCCAC
CAGCATCACG GCCTGACGCT CGGCCCGGTC ACCGGACGGC TGCTCGCCGA GATGATGACC
GGCGAACAGC CGCTGACCGA TCCGCGACCG TTCTCAGCCG AACGCTTCGG TTGA
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| Protein sequence | MKRNETDVVV LGAGIVGVCA ALHLQRRGRD VVLVDRNGTA GDETSYGNAG LIECASVFPY
MFPRDPGHLL RYALNGSADA HYQLSGIPEF LPWLVRYFLA SSPRRAAQTA QAALPLIRRS
LAEHEALIAD AGVPELLRKT GWIKLFRSPK SFAKALGDLE RARQFGVVAD VLDRAGIAER
EPNLTGDFAG AIHWLEPGSI PDPGGLVKAY AALFSRRGGR FVKGDARTLQ QEEGGWRVAT
ELGVVTAREA VVAMGPWSDL VFKPLGYRFP LGVKRGYHVH LTPRGNASLQ HAVLDADRGY
LLAPMNRGIR LTTGAEFARR DAPPSPVQIA QTLPVARALF PLGDTIEPQP WMGARPCLPD
MLPLIGRAPR HPGLWFDFGH QHHGLTLGPV TGRLLAEMMT GEQPLTDPRP FSAERFG
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