| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4289 |
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| Symbol | paaA |
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| ID | 6411973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4616321 |
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| End bp | 4617307 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714171 |
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| Product | phenylacetate-CoA oxygenase subunit PaaA |
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| Protein accession | YP_001993260 |
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| Protein GI | 192292655 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3396] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02156] phenylacetate-CoA oxygenase, PaaG subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00273791 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACACCC AGGCACTGAA TGTGTCGGAC GGTGACGAGC GGACCATCGA GGACGCCGAG
CGCGCCGCGC GTTTCCAGGC GCGGATCGAT GCCGAGGAGC GGATCGAGCC GAACGATTGG
ATGCCGGCGG CGTATCGCAA GACGTTGGTC CGACAGATCT CCCAGCACGC GCATTCCGAA
GTCGTCGGCA TGCTGCCGGA GGGCAACTGG ATCACCCGCG CGCCGACGCT GCGGCGCAAG
GCGGCGCTGC TCGCCAAGGT CCAGGACGAA TGCGGCCACG GCCTGTACCT TTACGCCGCC
GCCGAAACGC TCGGCGCCTC GCGCGAGGAG CTGGTCGATC AGCTGCTCAG CGGCAAGGCG
AAGTACTCGT CGATCTTCAA CTATCCGACC CTGACCTGGG CCGATATCGG CGCGATCGGC
TGGCTGGTCG ACGGCGCCGC GATCATGAAC CAGATCCCGC TGTGCCGCTG CTCCTACGGG
CCGTATGCGC GCGCGATGAT CCGCGTCTGC AAGGAGGAAT CCTTCCACCA GCGACAGGGC
TACGAGATCA TGCTGACGCT AGCCAAGGGC TCGGCCGAGC AGAAAGCGTT GGCGCAGGAC
GCGCTGAACC GCTGGTGGTG GCCGTGCCTG ATGATGTTCG GCCCGCCCGA TCAGGCCAGC
CAGCACAGCG ACACCTCCAC CAAGTGGAAG ATCAAGCGGT TCTCCAACGA CGAGTTACGG
CAGAAATTCG TCGATGCCAC GGTGCCGCAG GCGCACTATC TCGGCCTGAC GCTTCCCGAT
CCCGATCTGA AGCAGAACGA CGCGACCGGG CATTGGGAGT ACGGCGAAAT TCCTTGGGAC
GAGTTCAAGC AGGTGCTCGC CGGCAACGGC CCTTGCAACC GCGACCGCAT GGCGGCGCGG
CGCAAGGCCC ACGACGACGG CGCCTGGGTG CGCGAGGCGG CCGCTGCCTA CGCCGAGAAA
CGCAAGAAGA AACTGGCGGC GGCGTAA
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| Protein sequence | MYTQALNVSD GDERTIEDAE RAARFQARID AEERIEPNDW MPAAYRKTLV RQISQHAHSE
VVGMLPEGNW ITRAPTLRRK AALLAKVQDE CGHGLYLYAA AETLGASREE LVDQLLSGKA
KYSSIFNYPT LTWADIGAIG WLVDGAAIMN QIPLCRCSYG PYARAMIRVC KEESFHQRQG
YEIMLTLAKG SAEQKALAQD ALNRWWWPCL MMFGPPDQAS QHSDTSTKWK IKRFSNDELR
QKFVDATVPQ AHYLGLTLPD PDLKQNDATG HWEYGEIPWD EFKQVLAGNG PCNRDRMAAR
RKAHDDGAWV REAAAAYAEK RKKKLAAA
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