| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4288 |
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| Symbol | paaB |
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| ID | 6411972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4615860 |
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| End bp | 4616147 |
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| Gene Length | 288 bp |
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| Protein Length | 95 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714170 |
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| Product | phenylacetate-CoA oxygenase subunit PaaB |
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| Protein accession | YP_001993259 |
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| Protein GI | 192292654 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3460] Uncharacterized enzyme of phenylacetate metabolism |
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| TIGRFAM ID | [TIGR02157] phenylacetate-CoA oxygenase, PaaH subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0448206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCACGC CGAACACGCA GCTGTGGGAG GTTTTCATCC GCAACCGCAA CGGCCTCGCG
CACAAGCACG TCGGCTCGCT GCACGCCGCC GACGCCACGC TGGCGCTGCA GGCGGCGCGC
GACATCTACA CCCGCCGCGG CGAAGGCCTG TCGATCTGGG TGGTGCCGTC GAATGCGATC
ACCGCGAGCG ATCCGGCCGA GGCCGGCATG CTGTTCGAGC CGGCGGAATC CAAGATCTAT
CGCCATCCGA CGTTCTACGA AGTGCCCGAC GAAGTCGGGC ATATGTAG
|
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| Protein sequence | MTTPNTQLWE VFIRNRNGLA HKHVGSLHAA DATLALQAAR DIYTRRGEGL SIWVVPSNAI
TASDPAEAGM LFEPAESKIY RHPTFYEVPD EVGHM
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