Gene Rpal_4282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4282 
Symbol 
ID6411966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4609586 
End bp4610506 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content65% 
IMG OID642714164 
Product3,4-dihydroxyphenylacetate 2,3-dioxygenase 
Protein accessionYP_001993253 
Protein GI192292648 
COG category 
COG ID 
TIGRFAM ID[TIGR02295] 3,4-dihydroxyphenylacetate 2,3-dioxygenase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.594556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGCTCG ACGTCGTCGA TCTGAACAAA AGCGTCGAGT TCTACGACGA CATCATCGGC 
CTGCATGTCG AAGATCGCGA CGACACCACC GCTTACTTGC GCGGCTGCGA GGAGCATCAG
CATCATTCGT TGGTGCTGCG CAAAGCGGAC GCGCCCGCTG CGGCACGGCT CGGATTCAAG
GTCGGCAATG AAGACGACCT CGACAAGGCT GGCAGCTTCT TCGCCGAGAA CGGCCTGATC
TACAGCTTCG TCGATCGCCC GTTCCAGGGC CGCACCCTGC ACGTCACCGA TCCGTTCGGC
TATCGGCTCG AACTCTACGC GACGATGGAG AAACGGCCGC ATCTGCTCCG CCGCTACGAG
CGCTACAAGG GCTGCCATCC GCAGCGGCTC GACCATTTCA ACGTGTTCGC GGCCGAAACC
CAGGATACTG TCGACTTCTA TGCCCGCCTC GGCTTTCGCC TCACCGAATA CGCCGAGGAA
GACGGCGACG GCGGCCGGAT CGCCGCCGCG TGGATGCACC GCAAAGGCAA CGTTCATGAC
TTCGCGCTGA CCAATGGCCG CGGCCCGCGG CTGCACCATT TCGCCTATTG GGTGCCCGGC
CCGCTCAACG TCATCCATCT CTGCGACGTG ATGGCGTCGA GTGGCCTGGC GCTGGAGCGC
GGCCCCGGTC GCCACGGCAT CTCCAACGCC TTCTTCCTCT ATGTCCGCGA TCCCGACGGG
CACCGCATCG AGCTGTATTG CAGCGACTAC CAGACCATGG ACCACGACCA CGAGCCGCTC
CGCTGGTCGC TGCGCGACCC GCGCCGCCAG ACCCTATGGG GCGCGCCTGC GCCGCGCTCC
TGGTTCGAAC AGGGCTCGCC GTTCCTCGGC CAGGAAGTCC GCGAACCGGC CTTCGTAGCC
GATGTGGTGA TTGCGGATTG A
 
Protein sequence
MVLDVVDLNK SVEFYDDIIG LHVEDRDDTT AYLRGCEEHQ HHSLVLRKAD APAAARLGFK 
VGNEDDLDKA GSFFAENGLI YSFVDRPFQG RTLHVTDPFG YRLELYATME KRPHLLRRYE
RYKGCHPQRL DHFNVFAAET QDTVDFYARL GFRLTEYAEE DGDGGRIAAA WMHRKGNVHD
FALTNGRGPR LHHFAYWVPG PLNVIHLCDV MASSGLALER GPGRHGISNA FFLYVRDPDG
HRIELYCSDY QTMDHDHEPL RWSLRDPRRQ TLWGAPAPRS WFEQGSPFLG QEVREPAFVA
DVVIAD