| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4274 |
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| Symbol | |
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| ID | 6411958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4597551 |
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| End bp | 4600052 |
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| Gene Length | 2502 bp |
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| Protein Length | 833 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642714156 |
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| Product | protein of unknown function DUF404 |
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| Protein accession | YP_001993245 |
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| Protein GI | 192292640 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2307] Uncharacterized protein conserved in bacteria
[COG2308] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.306877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCAGC AAGGCGGCCC GGCCCGGAAG GCTCGACCGC GTGACCGCAA GGTTGCGCAA
TGGAGCCGGG ATTATGTGCG CCTGCCCGGC ATCCCCGATG AATTCATCGG CGCCGACGGC
CAGCCGCGCG CGGTGTGGAG TCGTTATTTC GACGCGTTCG CAGCTTTGTC GACCGACGAG
ATCGAGCGCC GCTTCGCCGC CGCCGACCGG CATCTGCGCG ATGCCGGCGT CACCTATCGG
GCACCGGGCG ACGCCGTGGA TCGCGCCTGG CCGCTCAGCC ACGTTCCGCT GCTGATCGGC
GAGAGCGAGT GGCAACAGAT CGCCGCCGGC ATCGCCCAGC GCGCGACGCT GCTGGAAGGC
GTGCTGCAGG ACATCTACGG CGACGGCCGA TTGATCGCTG ACGGCGCGCT GCCGGCCGCC
GCGATCGCCG GCAGCGCCGA TTACTTGCGG CCGATGGTCG GGGTGAAGCC GCCCGGTGGC
CGCTATCTGC ATTTTTACGC CGCCGACATC GGCCGTGGCC CGGACGGGCA GTGGTGGGTG
CTCGGCGATC GCACCCAGGC GCCGTCCGGC GCCGGCTACG CGCTGGAAAA CCGCCTGGTG
CTGTCGCGCG CCTTCAACGA TCTCTACAAA TCGATGAATG TCGAGCGCGT CGCCTCGTTC
TTCGAAGCGT TCCGTGACAG CCTGCGCGCC ACTGCCGATC GCGACGAGCC GCGCATCGGG
CTGCTGACGC CGGGCCGGTT CAGCGAGACG TATTTCGAGC ACGCCACATT GGCGCGCTAT
CTCGGCTTCC TGCTGGTGGA AGGCGACGAC CTCGCGGTCG CCGATGATCG TCTGCATATC
CGCACCGTCG CCGGTCTGAA GCGGATCGAC GTGCTGCTGC GCCGGGTCGA TGCCAACTCG
CTCGATCCGC TGGAGCTCGA CGCTTCGTCG CAGCTCGGCG TCGCCGGCCT GATCGACGTG
ATCCGCAAGA GCGGCGTCGT GGTTGCCAAC ATGCCGGGCT CCGGCGTGCT CGAAGCGCGC
TCGCTGCTCG GCTTCCTGCC GCCGCTGGCG CGCCGGCTGC TCGGCGAAGA CCTCAAGATG
CCGCACATCG CCACCTGGTG GTGCGGCCAA ACGGCGGCGC GCGAGGAAGT GCTCGACCGG
CTCGATGAGT TCGTGATCGA AGGCGCTTAC GGCCAGAACG TGCCGGGCTT CTCGCATCAC
GGCCCGGTGC TGCCCGGCGA ATTGCCGCCG GTGGTGCGCG ATCATTTGCG CGACGCGATC
GCGGCGCGCG GGCTCGACTA CGTCGCGCAG GAGCAGGTCC GGCTGTCGAC CACGCCGGTG
TGGGACGACG GCAAGCTGGC GCCGCGGCCG TTCGTGCTGC GCGTCTTCGC CGCCGCGACC
GAACACGGCT GGGCGGTGAT GCCCGGCGGG TTCTGCCGGA TCGCCGACCG GCTCGACTCG
CGCGCGGTGT CGATGGGCGA GGGCGCCCGT GCCGCCGATG TCTGGGTGGT GGCCGATCAT
GCGGTGGCGC CGTCGTCGCT GCTACCCGCG GTCGACAGCG TCCGGATTCG GCGCATCACC
GGCGTGCTGC CGAGCCGCGC CGCCGATAAT CTGTTCTGGC TCGGCCGCTA TCTCGAACGC
GCCGAGGCGA CGCTGCGGCT GCTGCGCGCG CTCAGCGCGC CGCAGCGCGA TCCCGGCAAG
GGGCCGCTGC ACCACGCCAT CGAGAAGATC CAGCGGCTGC TGATCGCCTG GGGCGCGACC
TCGCTCGGCC CGCGCGCGCA GACCGCCAAG ATCGCCGCCG ATGCGCTGCA GAGCCCGGAT
GAATTCGGCT CGGCGCTGTC GCTGATCCGC GCCGCCCAGC GCAACGCTTC GTCGCTGCGC
GAGCGGCTGT CGCCGGATGC CTGGCACGTC ATCACCCAGA TGGAGGCGCG CCTCGCCGTC
CCGGTCGAGG GCGAAGAAGC GGTAGTTCAG GCTGCGGAAG TCGCGCTTCA GGAGTTGGCC
AGCTTCTCCG GCCTGTCGAA CGAAAACATG AACCGCGCCG CCGGCTGGCG CTTCCTGCGG
ATCGGCCGCC GTGTCGAGCG CGCGGTCAAC ACCGCGCGGT TCGCCCGGCA GTTCTCCTGC
GACGGCGCCA CCGCCGAAGA CCTCGACGTG CTGCTGACGC TGGTGGATTC GCAGATCACC
TATCGGTCGC GCTATCTGTT GGCACCGCTG CTGGCGCCGG TGCGCGATCT CGCTGTGCTC
GATCCCTACA ATCCGCGCTC GGTGGCGTTC CAGGTCGAAG AGCTCAACGA TCACGTCGCC
AGTCTGCCGG CGCTGCATGA GGGCGGCCTG ATCGAGCGGC CGCAGCGGCT GGCGGTCTCC
ACTTTGGCCA AACTGACAGC GGCCGAAGTC GAGACGATCG ATGCGTCGTG GTTGTTCGCG
CTGGAACAGG ATCTGCTCAG CCTCGCCGAG GCCGTCGGTT CGCACTACTT CCCGCACGGC
GCCAGCGCGA TGCGACCGGA AAAGCTGATG GGGCTGGCGT GA
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| Protein sequence | MAQQGGPARK ARPRDRKVAQ WSRDYVRLPG IPDEFIGADG QPRAVWSRYF DAFAALSTDE
IERRFAAADR HLRDAGVTYR APGDAVDRAW PLSHVPLLIG ESEWQQIAAG IAQRATLLEG
VLQDIYGDGR LIADGALPAA AIAGSADYLR PMVGVKPPGG RYLHFYAADI GRGPDGQWWV
LGDRTQAPSG AGYALENRLV LSRAFNDLYK SMNVERVASF FEAFRDSLRA TADRDEPRIG
LLTPGRFSET YFEHATLARY LGFLLVEGDD LAVADDRLHI RTVAGLKRID VLLRRVDANS
LDPLELDASS QLGVAGLIDV IRKSGVVVAN MPGSGVLEAR SLLGFLPPLA RRLLGEDLKM
PHIATWWCGQ TAAREEVLDR LDEFVIEGAY GQNVPGFSHH GPVLPGELPP VVRDHLRDAI
AARGLDYVAQ EQVRLSTTPV WDDGKLAPRP FVLRVFAAAT EHGWAVMPGG FCRIADRLDS
RAVSMGEGAR AADVWVVADH AVAPSSLLPA VDSVRIRRIT GVLPSRAADN LFWLGRYLER
AEATLRLLRA LSAPQRDPGK GPLHHAIEKI QRLLIAWGAT SLGPRAQTAK IAADALQSPD
EFGSALSLIR AAQRNASSLR ERLSPDAWHV ITQMEARLAV PVEGEEAVVQ AAEVALQELA
SFSGLSNENM NRAAGWRFLR IGRRVERAVN TARFARQFSC DGATAEDLDV LLTLVDSQIT
YRSRYLLAPL LAPVRDLAVL DPYNPRSVAF QVEELNDHVA SLPALHEGGL IERPQRLAVS
TLAKLTAAEV ETIDASWLFA LEQDLLSLAE AVGSHYFPHG ASAMRPEKLM GLA
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