| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4256 |
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| Symbol | |
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| ID | 6411940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4575860 |
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| End bp | 4577020 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642714138 |
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| Product | hopanoid biosynthesis associated radical SAM protein HpnH |
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| Protein accession | YP_001993227 |
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| Protein GI | 192292622 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR03470] hopanoid biosynthesis associated radical SAM protein HpnH |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.59824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATTC CGTTTCACAA GGAACTGGTG ATCGGCGGTT ATCTGCTGAA GCAGAAGCTG
CTCGGGCGGA AGCGTTATCC GCTGGTACTG ATGCTGGAGC CGCTGTTCCG CTGTAACCTC
GCCTGCGCCG GCTGCGGCAA GATCGACTAT CCCGACGCGA TCCTGAACCG CCGGATGACC
GCACAAGAGT GCTGGGACGC CGCCGAGGAA TGCGGCGCGC CGATGGTTGC GATCCCGGGC
GGCGAACCGC TGATCCACAA GGAGATCGGC GAGATCGTGC GCGGCCTGGT GGCGCGCAAG
AAGTTCGTGT CGCTGTGCAC CAACGCGCTG CTGCTCGAGA AGAAGCTGCA TCTGTTCGAG
CCGTCGCCCT ACCTGTTCTT CTCGGTGCAT CTCGACGGCC TGAAGGAGCA CCACGACAAG
GCGGTGTCGC AGCAGGGCGT GTTCGACCGC GCAGTCGCGG CGATCAAGGC CGCCAAGGCC
AAGGGCTTCA CCGTCAACGT CAACTGCACG GTGTTCGACG GCTACGCCGC CGAAGACATC
GCCAAGTTCA TGGACTTCAC CGAGGAACTC GGCGTCGGCG TCTCGATCTC GCCGGGCTAC
GCCTATGAGC GCGCTCCGGA CCAGGAGCAC TTCCTCAACC GCACCAAGAC CAAGAACCTG
TTCCGCGAGG TGTTCGCGCG CGGCAAGGGC AAGAAGTGGA GCTTCATGCA CTCCAGCATG
TTCCTCGACT TCCTGGCCGG CAATCAGGAG TTCGAGTGCA CGCCGTGGGG TATGCCGGCG
CGCAACATTT TCGGCTGGCA GAAGCCCTGC TACCTGCTCG GCGAAGGCTA CGCCAAGACT
TTCCAGGAGC TGATGGAAAC CACCGATTGG GATTCCTACG GCACCGGCAA GTACGAGAAG
TGCGCCGACT GCATGGCGCA TTGCGGCTAC GAACCGACCG CGGCGATGGC CTCTCTCAAC
AATCCGCTGA AGGCCGCCTG GGTGGCGCTC CGCGGCATCA AGACCTCGGG CCCGATGGCG
CCGGAGATCG ACATGTCGAA GCAGCGCCCG GCGCAGTACG TGTTCTCCGA GCAGGTCCAG
AAGACGCTGA CGCAGATCCG CCAGGACGAG GCCGCCGAGG CCAAGGACAA GCGGCAGGCG
GAAAGGTCGA CGGCGGCCTG A
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| Protein sequence | MAIPFHKELV IGGYLLKQKL LGRKRYPLVL MLEPLFRCNL ACAGCGKIDY PDAILNRRMT
AQECWDAAEE CGAPMVAIPG GEPLIHKEIG EIVRGLVARK KFVSLCTNAL LLEKKLHLFE
PSPYLFFSVH LDGLKEHHDK AVSQQGVFDR AVAAIKAAKA KGFTVNVNCT VFDGYAAEDI
AKFMDFTEEL GVGVSISPGY AYERAPDQEH FLNRTKTKNL FREVFARGKG KKWSFMHSSM
FLDFLAGNQE FECTPWGMPA RNIFGWQKPC YLLGEGYAKT FQELMETTDW DSYGTGKYEK
CADCMAHCGY EPTAAMASLN NPLKAAWVAL RGIKTSGPMA PEIDMSKQRP AQYVFSEQVQ
KTLTQIRQDE AAEAKDKRQA ERSTAA
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