Gene Rpal_4252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4252 
Symbol 
ID6411936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4569308 
End bp4570210 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content69% 
IMG OID642714134 
Productalpha/beta hydrolase fold 
Protein accessionYP_001993223 
Protein GI192292618 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.733578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCTGA TCCATCGGCA CCGCCTTTGG ATCGACAACG CCGGTGTGCG GATCGCGCTG 
ACACGTTGGG GCGACGTCGA CCCGGGCAAG CCAGTGGCGC TGCTGCTGCA CGGCACCGGC
TTCGTCGGCG AGATCTGGGA CGAGATCGCG AACGGCCTCG CCGCCCGCTA CACCGTCTAT
GCGCTCGACC GCCGCGGTCA CGGCGCCAGC GACAAGCCCG GCCGTTATCA CTTCGCGGAC
TTCGCCTCGG ATCTCGCCGC GGCGATCGAG ACGTTGGGGC TGTCCGGCAT TTACGGCATC
GGCCATAGCG CCGGCGCGAC CGACCTGCTG CTAGCCGCCA AGCTGCTGCC CGACCGTTTT
GCCCGTCTGT TCGTGATGGA GCCGACGGTG ATGGACCCGA GCGTCGTTCC CGGCCGCGAT
GCGCGGCTGA GCGACCAGGG CGAGGCCGCG GTCAGCGGCG CCCGGCGCCG GCAGGCCGAA
TTCGCCAGCG CCGCCGCCGC CTTCGAACGC TACCGCAGCG CGCCGGCATT CGCCCCATGG
TCGGAATACG CGCTGCGCGC CTACATCACC CACGGCTTCG CGCACCTGCC GGATGGCCGG
GTGCGGCTGC TGTGCAGTCC GGACGTTGAA ACCGAGATCC TGCGGCCGAT CTTCGAGGCG
ATGGAGCAGG TCTATCGCGG CGACGAGCGC GGCAATCCGT TCGATTGGAT GCGCGAACTC
GGCTGCCCGG TTCGCATCGC CACCGCGGAG CTGTCGTGGC CGATCTACAA AGAGATGGCG
ACGCGGGCGA GCGCGTTGAT ACCTGGAGCA AGCCGGATCG CGTTCGATGG CGTCGGCCAC
TGCGTCGCAC AGGAAACGCC GGCACGGCTA CTTACCGCGC TGGAGGACTT TGCAGCCGCC
TGA
 
Protein sequence
MHLIHRHRLW IDNAGVRIAL TRWGDVDPGK PVALLLHGTG FVGEIWDEIA NGLAARYTVY 
ALDRRGHGAS DKPGRYHFAD FASDLAAAIE TLGLSGIYGI GHSAGATDLL LAAKLLPDRF
ARLFVMEPTV MDPSVVPGRD ARLSDQGEAA VSGARRRQAE FASAAAAFER YRSAPAFAPW
SEYALRAYIT HGFAHLPDGR VRLLCSPDVE TEILRPIFEA MEQVYRGDER GNPFDWMREL
GCPVRIATAE LSWPIYKEMA TRASALIPGA SRIAFDGVGH CVAQETPARL LTALEDFAAA