| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4251 |
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| Symbol | |
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| ID | 6411935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4567689 |
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| End bp | 4569308 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642714133 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001993222 |
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| Protein GI | 192292617 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.773505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGCAC GGATCGAAGG CGAATTCGAC ACCATCGTGG TGGGCGCGGG CACCGCAGGT
TGCATCGTCG CCAACCGCCT ATCCGCCGAT CCGAGCCGGA AGGTGCTGCT GCTCGAAGCC
GGCGGCCGCG ACAACTGGAT CTGGTTTCAC ATTCCGGTCG GCTATCTGTT CGCGATCGGC
AATCCGCGCT CCGACTGGAT GTTCAAGACC GAGCCCGAGC CGGGCCTGAA TGGTCGGTCA
TTGGCCTATC CGCGCGGCAA GGTGATCGGC GGCTCCTCGG CGATCAACGC GATGATCTCG
ATGCGCGGCC AGGCCGCCGA TTACGACCAT TGGCGTCAGC TCGGCCTCGC CGGCTGGGGC
TGGGACGATG TCCGCAAGGT GTTCCGCCGG CTCGAAGACC ACTTCCTCGG CGACAGCGAG
CATCACGGCG CCGGCGGCGG CTGGCGGATC GAGGCGGCGC GGCTGTCATG GCCGATCCTC
GATGCGGTGG CGAACGCCGC CTGCGAGATG GGGATCCCGC GCAGCGCCGA CTTCAACACC
GGCGACAACG AGGGCGTCGG CTATTTCCAC GTCAACCAGA AGCGCGGCCG GCGCTGGTCG
TCGGCGCGCG GCTTTCTCAA GCCCGCGCTG CATCGCTCCA ACCTGCGGCT CGAAACCAAT
GTCGTGGTCG ACCGCGTGCT GGTCGAGAAC GGCCGCGCCG TCGGCGTGCG CTTCCTGCAG
AACGGCGTGC CGATCGAAGC CCGCGCGCGC CGTGAGGTGG TGCTGTGCGC CGGCGCGATC
GGCTCGATCC AGGTGCTGCA TCGCTCCGGC ATCGGCCCGG CCGAATGGCT GAAGCCGCTC
GGCATCGAGC CGGTGCTCGA TCGCCCCGGC GTCGGGCGCA ACCTGCAGGA CCATCTGCAG
CAGCGCGCGA TCTACAAGGT CAGCGGTGGC CGCACGCTGA ACGAGATCTA TCACTCGCTG
CCGCGCCGCG CCTGGATGGG ACTCGACTAC GCGCTGCGCC GGCGCGGGCC GCTCACCATG
GCGCCGTCGC AGCTCGGCAT CTTCACCCGC TCCGATCCGC ATCAGGAGCG CGCCAACATC
CAGTTCCACG TGCAGCCGCT GTCGCTCGAC AAGTTCGGCG ATCCGCTGCA TCGCTTCCCG
GCGATCACCG TGAGCGCCTG CAACCTGCGG CCGACCTCGC GCGGCGAGAT CAAGCTGAAA
TCCACCGCGC TCGACGCCGC GCCGTCGATC GCGCCGCATT ATCTGTCGAC CGCGGACGAC
TGCCGCGTCG CAGCCGATGC GATCCGCGTC ACGCGGCGGC TAATGAAGCA GCACGCGCTG
GCGACGTATC ACCCGGAGGA GTATCTGCCC GGCCCGTCGG TCGGCGACGA CGACGCCTCG
CTCGCCAAGG CCGCCGGTGA CATCGGCACT ACGATCTTCC ATCCCGTCGG CACCGCCAAA
ATGGGCCGCG CCGACGATCC GCTCGCGGTC GTCGATGAAA GACTTCGCTT CCACGGCCTC
GAAGCCTTGC GCGTCGTCGA CGCCTCGATC ATGCCGACGA TCACCTCCGG CAACACCAAC
ACCCCCACCG CAATGATCGC CGAGAAGGGC GCGACGATGA TCCTGGAGGA CGGGAAGTAA
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| Protein sequence | MTARIEGEFD TIVVGAGTAG CIVANRLSAD PSRKVLLLEA GGRDNWIWFH IPVGYLFAIG
NPRSDWMFKT EPEPGLNGRS LAYPRGKVIG GSSAINAMIS MRGQAADYDH WRQLGLAGWG
WDDVRKVFRR LEDHFLGDSE HHGAGGGWRI EAARLSWPIL DAVANAACEM GIPRSADFNT
GDNEGVGYFH VNQKRGRRWS SARGFLKPAL HRSNLRLETN VVVDRVLVEN GRAVGVRFLQ
NGVPIEARAR REVVLCAGAI GSIQVLHRSG IGPAEWLKPL GIEPVLDRPG VGRNLQDHLQ
QRAIYKVSGG RTLNEIYHSL PRRAWMGLDY ALRRRGPLTM APSQLGIFTR SDPHQERANI
QFHVQPLSLD KFGDPLHRFP AITVSACNLR PTSRGEIKLK STALDAAPSI APHYLSTADD
CRVAADAIRV TRRLMKQHAL ATYHPEEYLP GPSVGDDDAS LAKAAGDIGT TIFHPVGTAK
MGRADDPLAV VDERLRFHGL EALRVVDASI MPTITSGNTN TPTAMIAEKG ATMILEDGK
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