Gene Rpal_4248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4248 
Symbol 
ID6411932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4562884 
End bp4563930 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content68% 
IMG OID642714130 
ProductMg2 transporter protein CorA family protein 
Protein accessionYP_001993219 
Protein GI192292614 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACCG TATTGCCACT CGCGGGTGAT GTCCGCTTCA GCGTTCCCGA GGGGGAAGCC 
GCCGCCGGCG CGGCCGCGCA GCCGACGGTG CCTGGCCTGA TCTGGTCATT CAGAATCGGC
CCCGACGGCG CGGCGCAAAG CGGACCGGAC GGCGGCTTTC CGCTCGAACC GCATGACGGC
TGGACCTGGC TGCACCTCGA TCTCACCGAC ACCCGCGCGC TGCAGTGGAT CGGCGGCACC
GCGTTGCCGC CGCCTGCCAA GACGCTGCTG CAGGCGGCCG ACGTCTATCA GCAGATCCAC
AGCCTGGACG GCTGCGTATA CGGCGCGATC GCCGACCTCG GCCGCGACAT CGACGAAATC
ACCGAGGATA TCGGGTTGCT GCGGTTCGTG ATGACCGAGC ATCTGGTGAT CACCGGCCGC
CACCAGCCGC TCGGCGCGGT CGACGCCGCG CGGCGGGCGC TGGAAAACGG CCAACGGGTC
GAGAGCTGTG CCGGCCTGTT CGACCTGATC GTCCACAACG TCGCCGAGGC GATCGAAGCG
ATCGCCGACG ACATGGTGCA GGCGCTCGAC CGGCTCGAGG AAAAGCTGCT CACCGACGAT
ACGGACGAAC TGCGCCAGGG CCTCGGCCGG CTACGCCGGA GTTGCGTACG GCTGCACCGG
CATCTGTCGG GACTGCGGGT GCTGCTGCAC CGGTTTAACC GCGACGGCAC CGAGCTGGCG
CCGTCGCTGC GTCCCTGTGC CGGCAAGCTG GCGCAGCGGC TCGACGGGCT CGACCATTCG
GTGGTGGAGA TGCGCGAGCG CAGCCGGCTA CTGCAGGAAG AGCTGCACCT GCAGATCGAG
GAACAGGGCA ACAATAGCCT GCGGGTGCTG TCGGTGCTGA CCGCGTTGCT GCTGCCGCCG
ACCCTGGTCA CCGGCATGTT CGGCATGAAC CTGCACGGCC TGCCGTTCTC CGAGGATGGC
GGCGGCTTCG GCTGGGCGCT GGTGATCATG CTGCTGTCGT CGATCGTCGC CTATGTGGTG
ATGAAGCGTT TCGGCCTCAT CAGGTAG
 
Protein sequence
MPTVLPLAGD VRFSVPEGEA AAGAAAQPTV PGLIWSFRIG PDGAAQSGPD GGFPLEPHDG 
WTWLHLDLTD TRALQWIGGT ALPPPAKTLL QAADVYQQIH SLDGCVYGAI ADLGRDIDEI
TEDIGLLRFV MTEHLVITGR HQPLGAVDAA RRALENGQRV ESCAGLFDLI VHNVAEAIEA
IADDMVQALD RLEEKLLTDD TDELRQGLGR LRRSCVRLHR HLSGLRVLLH RFNRDGTELA
PSLRPCAGKL AQRLDGLDHS VVEMRERSRL LQEELHLQIE EQGNNSLRVL SVLTALLLPP
TLVTGMFGMN LHGLPFSEDG GGFGWALVIM LLSSIVAYVV MKRFGLIR