Gene Rpal_4247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4247 
Symbol 
ID6411931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp4562139 
End bp4562639 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content61% 
IMG OID642714129 
Productprotein of unknown function DUF892 
Protein accessionYP_001993218 
Protein GI192292613 
COG category[S] Function unknown 
COG ID[COG3685] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGCCA CCAAAGACAA GGACCTCAAC GACCTGTTCC TCGACACCTT GAAGGACATC 
TATTTCGCCG AGAAGCAGAT CCTGAAGGCG TTGCCGAAGA TGGCGAAGGC CGCAACCTCC 
GACAAACTGC GCGCCGCATT CGAGAAGCAT CGTGACGAAA CCGAAGGCCA GATCGAGCGA 
CTGGAGCAGG TGTTCGAACT GCTCGAGAAG CCGGCCCGCG GCAAGACCTG CGACGCGATC 
CTCGGCATCA TCGACGAGGG CAAGGAGATC ATGGACGAGT ACAAGGGCAC CGAGGCGCTC 
GATGCCGGCC TGCTCGCCGC GGCCCAGGCG GTCGAACACT ACGAGATCTC TCGCTACGGA 
ACCCTGAAGC AGTGGGCGAC CCAGCTCGGC ATGAAGGACG CTGCCAAGTT GATCGACCAG 
ACGCTGCAGC AGGAAAAGAC CACCGATCAG ACCCTGACCA AGCTCGCCGA GAGCTCGATC 
AACGTTGCAG CCGCGGCCTG A
 
Protein sequence
MVATKDKDLN DLFLDTLKDI YFAEKQILKA LPKMAKAATS DKLRAAFEKH RDETEGQIER 
LEQVFELLEK PARGKTCDAI LGIIDEGKEI MDEYKGTEAL DAGLLAAAQA VEHYEISRYG 
TLKQWATQLG MKDAAKLIDQ TLQQEKTTDQ TLTKLAESSI NVAAAA