| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4246 |
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| Symbol | |
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| ID | 6411930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4560785 |
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| End bp | 4562014 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642714128 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_001993217 |
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| Protein GI | 192292612 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTCAC TCCGTTCGCA CGCGGCTGCG CTTTCCGCGG CAGTTCTCGT CAGTTTCGCA
GCCTCGAACG GCGCGCTCGC GCAAAAGAAG TACGATCCGG GCGCAAGCGA TACCGAAATT
AGAATCGGCA ACATCATGCC CTACAGCGGC CCCGCTTCCG CCTATGGCGT GATCGGCCGC
ACCGAGGCCG CCTATTTCAA AATGATCAAC GACAAGGGCG GCATCAACGG GCGCAAGATC
AACTTCATCA GCTACGACGA TGCCTATTCG CCGCCGAAGA CCGTGGAGCA AGCGCGCAAG
CTGGTCGAGA GCGACGAGGT GCTGCTGATC TTCAATTCGC TCGGCACACC GCCGAATTCG
GCGATCCACA AATACATGAA CAGCAAGAAG GTACCGCAGC TGTTCGTCGC CACCGGCGCC
AGCAAATGGA ACGACCCGAA GAACTATCCG TGGACGATGG GCTGGCAGCC AAACTACCAG
AGCGAAACCC AGATCTACGC CAAATATATC CTGAAGGAGA TGCCGAACGC CAAGATCGCC
GTGCTGTATC AGAACGACGA TTACGGCAAG GACTATCTGA AAGGCTTCGA AGACGGTCTC
GGCGCGAAGG GCCAGTCGAT GATCGTGATG AAGGAAAGCT ATGAGGTCTC GGAGCCGACG
ATCGACAACC ACATCGTCAA GCTGAAGTCG ACCGGCGCCG ACGTCTTCAT CAACATCACC
ACGCCGAAAT TCGCCGCCCA GGCGATCAAG AAGCTGGCGG AAGTCGGCTG GAAGCCGACC
CACTTCCTCA ACAACGTCTC GGCCTCGGTC GGCAGCGTGA TCAAGCCGGC CGGCTATGAG
AACGCCCAGG GCGTGATCTC TGCGGCCTAT CTGAAGGACG TCTCTGACGA CCAGTGGAAG
GACGACGCCG GCATGAAGCA GTTCCTCGCC TTCATGGACA AGGAGTTCCC GGAAGGCAAC
AAGCTCGACG GCGGCACCAT CGTCGGCTAC GGCGTGGCGC AGACGCTGGT CGAAGTGCTG
AAGGCCTGCG GCGACAACCT GACTCGCGAG AACGTCATGA AGCAGGCCGC CAGCCTGAAG
GACTATCGCA CCGAAGTGCT GCTGCCGGGC ATCAAGATCA ACACCTCGGC CACCGACTTC
GCCCCGGTCA GCCAGCTGCA GCTGATGCGG TTCAAGGGCG AGAAGTGGGA GCTGTTTGGC
GACGTCATCA GCGCCGACGT CGGCGGCTGA
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| Protein sequence | MPSLRSHAAA LSAAVLVSFA ASNGALAQKK YDPGASDTEI RIGNIMPYSG PASAYGVIGR
TEAAYFKMIN DKGGINGRKI NFISYDDAYS PPKTVEQARK LVESDEVLLI FNSLGTPPNS
AIHKYMNSKK VPQLFVATGA SKWNDPKNYP WTMGWQPNYQ SETQIYAKYI LKEMPNAKIA
VLYQNDDYGK DYLKGFEDGL GAKGQSMIVM KESYEVSEPT IDNHIVKLKS TGADVFINIT
TPKFAAQAIK KLAEVGWKPT HFLNNVSASV GSVIKPAGYE NAQGVISAAY LKDVSDDQWK
DDAGMKQFLA FMDKEFPEGN KLDGGTIVGY GVAQTLVEVL KACGDNLTRE NVMKQAASLK
DYRTEVLLPG IKINTSATDF APVSQLQLMR FKGEKWELFG DVISADVGG
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