Gene Rpal_4240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4240 
Symbol 
ID6411924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4554169 
End bp4554969 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content62% 
IMG OID642714122 
ProductABC transporter related 
Protein accessionYP_001993211 
Protein GI192292606 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCAGG CTCAGTCTTC TTCTTCCGCG TCGCCGCTTC TTGCGGTGCG CGACGTCAGC 
GTCGTGTTCG GTGGCATCGT CGCCCTGAAC GGCATTTCTT TCAACATGCA AAAGGGTCAG
ATCCTCGGAC TGATCGGCCC GAACGGCGCC GGCAAGACCA CGTTGTTCAA CTGCCTGTCG
CGGCTGTATC AACCGAGCAA AGGCGACATC CTGCTCGAAG GCGAGAGCAT TCTGACGCGG
CCGCCGCACC GCATCGCGGA GATCGGAATC GGCCGCACGT TCCAGAACGT CGCGCTGTTC
CCGAACATGT CGGTGATCGA CAACGTGCGC GTCGGCGCGC ATTGCCGCAC CAATAGCGAC
ATCGTTTCGG ATTCGCTGCG CATGCCGTGG ATCCGCAGCA CCGAGAAGGC GCTGAACAAG
AAGGTCGACG ATATCCTCGG CTATCTCGAT CTGCGCAGCG TCGGCCACAC CACGGTGTCG
GGCCTGCCGT TCGGCACCCA GAAGCGCGTC GAGCTGGCGC GTGCGCTCGC TGCCGAGCCG
AAGATCCTGC TGCTCGACGA ACCGGCCGGC GGTCTCAATC ACGAGGAAGT CTATATCCTC
GGCGACCTGA TCCGCCGCAT TCGCGACGAC CGCGGCATCA CCGTGCTGCT GGTCGAACAC
CACATGGGTA TGGTGATGTC CACAGCCGAC TACGTGGTCG CGCTCAATTT CGGACGCAAG
CTCGCAGAGG GGACGCCGAC CCAGGTGCAG AACGACCCGG ATGTGATCAA GGCCTATCTG
GGGAGCAAAG ACGAACAATG A
 
Protein sequence
MMQAQSSSSA SPLLAVRDVS VVFGGIVALN GISFNMQKGQ ILGLIGPNGA GKTTLFNCLS 
RLYQPSKGDI LLEGESILTR PPHRIAEIGI GRTFQNVALF PNMSVIDNVR VGAHCRTNSD
IVSDSLRMPW IRSTEKALNK KVDDILGYLD LRSVGHTTVS GLPFGTQKRV ELARALAAEP
KILLLDEPAG GLNHEEVYIL GDLIRRIRDD RGITVLLVEH HMGMVMSTAD YVVALNFGRK
LAEGTPTQVQ NDPDVIKAYL GSKDEQ