Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4240 |
Symbol | |
ID | 6411924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 4554169 |
End bp | 4554969 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642714122 |
Product | ABC transporter related |
Protein accession | YP_001993211 |
Protein GI | 192292606 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCAGG CTCAGTCTTC TTCTTCCGCG TCGCCGCTTC TTGCGGTGCG CGACGTCAGC GTCGTGTTCG GTGGCATCGT CGCCCTGAAC GGCATTTCTT TCAACATGCA AAAGGGTCAG ATCCTCGGAC TGATCGGCCC GAACGGCGCC GGCAAGACCA CGTTGTTCAA CTGCCTGTCG CGGCTGTATC AACCGAGCAA AGGCGACATC CTGCTCGAAG GCGAGAGCAT TCTGACGCGG CCGCCGCACC GCATCGCGGA GATCGGAATC GGCCGCACGT TCCAGAACGT CGCGCTGTTC CCGAACATGT CGGTGATCGA CAACGTGCGC GTCGGCGCGC ATTGCCGCAC CAATAGCGAC ATCGTTTCGG ATTCGCTGCG CATGCCGTGG ATCCGCAGCA CCGAGAAGGC GCTGAACAAG AAGGTCGACG ATATCCTCGG CTATCTCGAT CTGCGCAGCG TCGGCCACAC CACGGTGTCG GGCCTGCCGT TCGGCACCCA GAAGCGCGTC GAGCTGGCGC GTGCGCTCGC TGCCGAGCCG AAGATCCTGC TGCTCGACGA ACCGGCCGGC GGTCTCAATC ACGAGGAAGT CTATATCCTC GGCGACCTGA TCCGCCGCAT TCGCGACGAC CGCGGCATCA CCGTGCTGCT GGTCGAACAC CACATGGGTA TGGTGATGTC CACAGCCGAC TACGTGGTCG CGCTCAATTT CGGACGCAAG CTCGCAGAGG GGACGCCGAC CCAGGTGCAG AACGACCCGG ATGTGATCAA GGCCTATCTG GGGAGCAAAG ACGAACAATG A
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Protein sequence | MMQAQSSSSA SPLLAVRDVS VVFGGIVALN GISFNMQKGQ ILGLIGPNGA GKTTLFNCLS RLYQPSKGDI LLEGESILTR PPHRIAEIGI GRTFQNVALF PNMSVIDNVR VGAHCRTNSD IVSDSLRMPW IRSTEKALNK KVDDILGYLD LRSVGHTTVS GLPFGTQKRV ELARALAAEP KILLLDEPAG GLNHEEVYIL GDLIRRIRDD RGITVLLVEH HMGMVMSTAD YVVALNFGRK LAEGTPTQVQ NDPDVIKAYL GSKDEQ
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