| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4231 |
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| Symbol | nirA |
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| ID | 6411915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4540519 |
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| End bp | 4542291 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642714113 |
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| Product | ferredoxin-nitrite reductase |
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| Protein accession | YP_001993202 |
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| Protein GI | 192292597 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
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| TIGRFAM ID | [TIGR02435] precorrin-3B synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAGCG AATTCTCGAT CGACCAGAAG CGCTATCTCG AAGGCTTCGC CACCGGCGTC
ACTGCGGCGC GCGCCGCGCG CGGCAGCCTG CCGGCCGGCG GCGCCGCGTC ACCCAGCGGC
CCGGACGCGA TCCACATTGC AGCGCAGGAC CGCGTCACCG CGTCGGGCAA GAAGCTCAAC
GACCAGGAGA AGTGGAAGCG CGAGCAGCAT CCGTTCGACG CCTATGCCCG GCTGAAGCAG
CAGGCACGCG ACAACGCTGC GCCGAAGCCG GCGGACAATT TCCGCTGGCG ATACTACGGG
CTGTTTTACG TCGCCCCGGC GCAGACCTCG TATATGTGCC GCCTGCGTAT TCCCAATGGC
ATCCTGACGT CGTGGCAGAT GGCCGGCCTC GCCGATCTCG CCGACACGCT CGCCGGCGGC
TACGCGCATG TCACGACGCG CGCCAATTTG CAGATGCGCG AGATCGCGCC GAAGAACGCC
GTGCTGCTCC TGCAGGGCAT CGAAAGCCTC GGGCTGTGGG CGCGCGGCTC CGGCGCCGAC
AACATCCGCA ACGTCACCGG CTCGGCGACC GCCGGCATCG ATCCGCAGGA GCTGATCGAT
ACGCGGCCCT ACGCCCGCGA CTGGCATTTC CACATCCTCA ACGAGCGCGC GCTGTTCGGG
CTGCCGCGCA AGTTCAACGT CGCGTTCGAC GGCGGCGGAC TGATCCCGAC GCTGGAGGAC
ACCAACGACA TCGCGTTCCA GGCAGTGCAG ATCGCGGACG GCCACGGCGT CGCACCCGGC
GTGTATTTCC GCCTCGCGCT CGGCGGCATC ACCGGCCACA AGGACTTCGC CCGCGACACC
GGCGTGATCG TGGCGCCCGA CGAGGCGACC GAGGTCGCGG ATGCGATCGT GCGGGTATTC
ATCGAGCACG GCGACCGCAC CGACCGCAAC AAGGCGCGGC TGAAATACGT GCTCGATGCG
TTCGGCTTCG ACAATTACTT CGGCTTGGTC GAGGACAAAC TCGGCCGCAA GCTGATCCGT
GTGCCGGCCG AAGCTGCGTC GCCGCGCCCC GCACAGGATC GCGCCGCGCA TCTCGGCGTG
CATCCGCAGC AGCAGGCCGG GCTGAATTGG ATCGGCGTCC GTCTCGCCAC CGGCCATCTC
ACGTCCGTTC AGATGCGCGG GCTCGCCGAG ATCGCGCGCA GCTTCGGCGA CGGCGATCTG
CGGCTGACCG TGTGGCAGAA CTTATTGATC TCCGGCGTGC CGGATGCGCG CGTAGCCGAC
GCCACCGCCG CGATCGAGGC GCTGGGACTG GCGATCACCG CCTCGCCACT GCGCGCCGGA
CTGATCGCCT GCACCGGCGC CAGCGGCTGC CGCTTCGCCG CCGCGCATAC CAAGGAGACC
GCGGAAGCGA TCGCGCAATA TTGCGAGCCG CGCGTGCCTC TCGACACGCC GATCAACATC
CATCTCACCG GCTGTCATAA CTCCTGCGCG CAGCACTTCA TCAGCGACAT CGGCCTGATC
GGCGCCAAGG TCGCGATCTC GGATGAGGAC AGCGTCGAAG GCTTTCATAT CCACGTTGGC
GGCGGCTTCG GCGTTGATGC GGCGATCGGC ACCGAGGTGC TGCGCGACGT CAAGCAGGAC
GATGCACCAC GCGTGATCGA GCGGATGCTG CAGACCTATC TCGCACGCCG CGCGTCACCT
GCCGAGACCT TCCTCGCCTT CGTCCGCCGC CACGATGCGG CGGCGCTGCA GCAACTATTC
GCATCCGAGC AATCACCGGA GACCGTGGCA TGA
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| Protein sequence | MGSEFSIDQK RYLEGFATGV TAARAARGSL PAGGAASPSG PDAIHIAAQD RVTASGKKLN
DQEKWKREQH PFDAYARLKQ QARDNAAPKP ADNFRWRYYG LFYVAPAQTS YMCRLRIPNG
ILTSWQMAGL ADLADTLAGG YAHVTTRANL QMREIAPKNA VLLLQGIESL GLWARGSGAD
NIRNVTGSAT AGIDPQELID TRPYARDWHF HILNERALFG LPRKFNVAFD GGGLIPTLED
TNDIAFQAVQ IADGHGVAPG VYFRLALGGI TGHKDFARDT GVIVAPDEAT EVADAIVRVF
IEHGDRTDRN KARLKYVLDA FGFDNYFGLV EDKLGRKLIR VPAEAASPRP AQDRAAHLGV
HPQQQAGLNW IGVRLATGHL TSVQMRGLAE IARSFGDGDL RLTVWQNLLI SGVPDARVAD
ATAAIEALGL AITASPLRAG LIACTGASGC RFAAAHTKET AEAIAQYCEP RVPLDTPINI
HLTGCHNSCA QHFISDIGLI GAKVAISDED SVEGFHIHVG GGFGVDAAIG TEVLRDVKQD
DAPRVIERML QTYLARRASP AETFLAFVRR HDAAALQQLF ASEQSPETVA
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