| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4222 |
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| Symbol | |
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| ID | 6411906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4527827 |
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| End bp | 4528843 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642714104 |
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| Product | Luciferase-like monooxygenase |
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| Protein accession | YP_001993193 |
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| Protein GI | 192292588 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.504496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCCAC TCTCGATCCT CGATCTGTCC GTCGTCACCA CCGGCACACC GCCGGCGGCG
TCATTGCGCA ACTCGATCGA CCTTGCGCGC CACGCGGATT CGCTGGGCTA TGTGCGCTAC
TGGCTGGCCG AGCATCACAA TCTTCCCTCG GTCGCCAGTC CCGCGCCCGA AATCATGATT
GGGCAGATCG CGGCGGTGAC CGAACGCATT CGCGTCGGCT CCGGTGGCGT GATGCTGCCG
AACCACGCGC CGCTGGTCGT GGCGGAACGC TTCAAGATGC TTGAAGCGCT GTTCCCCGGT
CGGATCGATC TCGGTATCGG CCGCGCGCCG GGCACCGACC AGGCGACGAT GCACGCGTTG
CGCCGCCGGC TCGATGGCCG TGAGGGCGAC GATTTTCTGG AGCGGCTGCA AGAGCTGACG
CTGTGGGAGA CGCGCGGCTT TCCGCCGGGC CATCCGTACA ACAACGTCGT CGCGATGCCC
GACGATACGC CGCTGCCGCC GATCTGGCTG CTCGGCTCCA GCGACTACAG TTCCGAGCTC
GCCGCGCAGG TCGGTATGGG CTTCGCGTTC GCGCATCACT TCGCTTCGCA CGATGCGGTC
GAGGCACTGA CGCATTATCG CAGCAACTTC CGTCCGACGC GCTGGCGATC GACGCCACAC
GGTATTTTGG CCGTCGCCGC CGTTGTCGCC GACACCGATG AGGAAGCGGA GCGGCTAGCG
AGTTCGATGG ATCTCAGTCG CCTGTTACGC GACCGTGGCC GCTACGTGCC GCTGCCAAGT
GTCGAGGAAG CTCTGTCTTA TTCTTACACT GAAGCCGACC GTGCCTCGAT CGCGCGCAAT
CGCTCGCGGC TGTTCGTCGG CAGTCCGGCG ACGGTTCGGC AGGCGCTGCA GCCGCTGATT
ACCGCAAGCC GCGCCGACGA GCTGATGGTG ATCACCGCGG TGTATGACCA CGATGCGCGC
AAGCGGTCCT ACAGCTTGCT GGCCGACGCG TTCGAGCTGC AGAAGGTGGC AGCTTAG
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| Protein sequence | MLPLSILDLS VVTTGTPPAA SLRNSIDLAR HADSLGYVRY WLAEHHNLPS VASPAPEIMI
GQIAAVTERI RVGSGGVMLP NHAPLVVAER FKMLEALFPG RIDLGIGRAP GTDQATMHAL
RRRLDGREGD DFLERLQELT LWETRGFPPG HPYNNVVAMP DDTPLPPIWL LGSSDYSSEL
AAQVGMGFAF AHHFASHDAV EALTHYRSNF RPTRWRSTPH GILAVAAVVA DTDEEAERLA
SSMDLSRLLR DRGRYVPLPS VEEALSYSYT EADRASIARN RSRLFVGSPA TVRQALQPLI
TASRADELMV ITAVYDHDAR KRSYSLLADA FELQKVAA
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