Gene Rpal_4218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4218 
Symbol 
ID6411902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp4523554 
End bp4524180 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content69% 
IMG OID642714100 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001993189 
Protein GI192292584 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.566415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGGA AAAGCTCGAA GAACCGCATG GAGCCGCGTA AAAGGCCGGC TCAGGCGCGG 
TCCGCCGAAA CCGTCGCGGC GATCGTCGAA GCCGCTGCTC GCATTTTGGA GGACAAGGGA 
TTTCGCGGTT ACAACACCAA CGATGTCGCG GCGCGCGCCG GCGTGAGCAT CGGGTCGCTG 
TATCAGTACT TCCCGAACAA GGACGCGATT ACCAAGGCGC TGCTGCGCCG GGAGACCGAG 
CCGCTGAGCG CGGCGCTCGA GCAGGTCGGC GACGCGCCGT CACTGGCCGA GGGGCTGCAA 
CGTTTCGTCC GCGCGGCGGT GGCGCATCAG CTACGGCGGC CGGTGCTGGC CCGGCTACTG 
GATTTCGAGG AGGCCCGGCT TCCTCTCCAG GCCGAAGTCG GCGCCCTTGG AGACGTCGGC 
GCGAAGGCGC TCGCGCGGCT GCTGGCGCGG CACGGTGCCG GGCGAGGCGC CGCCGCGCGG 
ACGGCGAGCC GCGACCTGTT TGCGATCGCC AGAGGGATGA TCGATGCAGC GGGCGAGCGC 
GGCGAGACCG ATGCTCGCGG CCTTGAAACG CGTGTGGCCG CGGCGATGTC CGGCTATCTT 
GAGCGAATGA AGATCATCGA CCTGTGA
 
Protein sequence
MARKSSKNRM EPRKRPAQAR SAETVAAIVE AAARILEDKG FRGYNTNDVA ARAGVSIGSL 
YQYFPNKDAI TKALLRRETE PLSAALEQVG DAPSLAEGLQ RFVRAAVAHQ LRRPVLARLL 
DFEEARLPLQ AEVGALGDVG AKALARLLAR HGAGRGAAAR TASRDLFAIA RGMIDAAGER 
GETDARGLET RVAAAMSGYL ERMKIIDL