| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4217 |
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| Symbol | |
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| ID | 6411901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4522672 |
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| End bp | 4523514 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642714099 |
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| Product | prephenate dehydratase |
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| Protein accession | YP_001993188 |
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| Protein GI | 192292583 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0077] Prephenate dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.239434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCG CATTCCAGGG CGAACCCGGC GCCAATTCCC ACATCGCGAT CAGCGACGCC
TATCCCACCG CCGAGGCGAT GCCTTGCGCC ACCTTCGAGG ACGCGCTGAG CGCGATCTCC
TCCGGTGAAG CCGATCTCGG CATGATCCCG ATCGAGAACT CGGTCGCCGG CCGTGTCGCC
GATATCCATC ATCTGCTGCC GACTTCGAAG CTGTTCATCG TCGGCGAGTG GTTCCTGCCG
ATCCGGCATC AGCTCGTGGC TGTGCCCGGC GCCAAGCTCG AAGACATCAA GACGGTCGAA
AGCCACGTCC ATGCGCTCGG CCAGTGCCGC CGCATCATCC GCAAGTTCGG ACTGAAGCCG
ATCGTCGCTG GCGACACCGC CGGCTCGGCA CGGATCATCG CCGAACGCGG CGACAAGACC
TGCGCGGCGA TTTCGTCGCG GCTGGCGGCG AAGATCTATG GTCTCGACAT CCTGGCCGAG
GACATCGAGG ACGAGGCACA CAACACCACC CGCTTCGTCG TGCTGGCACG CGAGCCGCGC
TGGGCGGCGC AAGGCTCCGG CAAGCTCGTC ACCACTTTTG TGTTCCGGGT GCGCAACCTG
CCGGCCGCGC TCTACAAGGC GCTCGGCGGT TTCGCCACTA ACGGCGTCAA CATGACCAAG
CTCGAAAGCT ACATGGTTGA CGGCAATTTC TTCGCGACGC AGTTTTACGC CGACGTCGAA
GGCCATCCGG AAGACCGCAA CCTCGCCTTC GCGCTCGACG AACTGAAGTT CTTCTCCCGC
GAATTCCGCA TCGTCGGCGT CTATCCGGGC CACCCGTTCC GCGCGACGTT CAGCGAGCGC
TGA
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| Protein sequence | MKIAFQGEPG ANSHIAISDA YPTAEAMPCA TFEDALSAIS SGEADLGMIP IENSVAGRVA
DIHHLLPTSK LFIVGEWFLP IRHQLVAVPG AKLEDIKTVE SHVHALGQCR RIIRKFGLKP
IVAGDTAGSA RIIAERGDKT CAAISSRLAA KIYGLDILAE DIEDEAHNTT RFVVLAREPR
WAAQGSGKLV TTFVFRVRNL PAALYKALGG FATNGVNMTK LESYMVDGNF FATQFYADVE
GHPEDRNLAF ALDELKFFSR EFRIVGVYPG HPFRATFSER
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