| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4216 |
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| Symbol | |
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| ID | 6411900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4521863 |
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| End bp | 4522600 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642714098 |
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| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
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| Protein accession | YP_001993187 |
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| Protein GI | 192292582 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.616045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACATCTC CAGCCACTCT GGTTCTGATC CCTGCCCGGA TGGCCGCTAC GCGGTTGCCC
GGCAAACCGC TGCTCGACAT CGCCGGGCTG CCGATGGTGG TGCAGGTGCT GCGCCGGGCC
CAGGCGGCGG AAATCGGACG GGTGGCGGTA GCGACCGATG CGCCGGAGAT CGCCGCCGCG
GTGACCGCCC ATGGCGGCGA GGTGGTGATG ACCCGCGCCG ACCATCCCTC CGGATCGGAC
CGCATCTTCG AGGCGCTGCA GACACTGGAT CCGGACCGCA AGATCGAAAC CGTGATCAAC
CTGCAGGGCG ATTTCCCGAC CATCCGCCCC GAGCAGATCG GCGCGGTGCT GGGGCCGCTC
GCCGACCCGG CCGTCGACAT CGCCACGTTG GCGGCCGAGA TCCACACCGA GGAAGAGGCC
ACCAATCCGA ACGTGGTCAA GGTGATCGGC TCGCCGCTCG CCGCGGACCG GCTGCGGGCG
CTGTATTTCA CCCGCGCGAC CGCCCCATGG GGCGACGGAC CGCGCTACCA TCATATCGGC
CTGTACGGCT ACCGCCGCGC CGCCCTAGAG CGGTTCGTGG CACTGCCCCC TTCCCCACTC
GAGCTGCGCG AGAAGCTCGA ACAGCTCCGT GCGCTAGAGG CCGGGATGCG GATCGACGTC
GGCATCGTCG ACACCGTGCC CCGCGGGGTC GATACGCCGG CAGATCTCGA GACCGCACGG
CGCGTGCTCG GCGGCTGA
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| Protein sequence | MTSPATLVLI PARMAATRLP GKPLLDIAGL PMVVQVLRRA QAAEIGRVAV ATDAPEIAAA
VTAHGGEVVM TRADHPSGSD RIFEALQTLD PDRKIETVIN LQGDFPTIRP EQIGAVLGPL
ADPAVDIATL AAEIHTEEEA TNPNVVKVIG SPLAADRLRA LYFTRATAPW GDGPRYHHIG
LYGYRRAALE RFVALPPSPL ELREKLEQLR ALEAGMRIDV GIVDTVPRGV DTPADLETAR
RVLGG
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