| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4212 |
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| Symbol | |
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| ID | 6411896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4516010 |
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| End bp | 4517119 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642714094 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001993183 |
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| Protein GI | 192292578 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.477185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCCT ATATCGCCCG CCGCATCCTG CTGATGTTTC CCACGCTGCT CGGGATTCTG
TTCGTGTCGT TCGTCGTGGT GCAGTTCGCG CCCGGCGGTC CCGTCGAACG GGTGATCGCG
CAGATCTCCG GCGCCGACAC CGGCGCGTCG TCACGCATCT CCGGTTCTTC CGGCGGCGAC
TTCGGCGCGC GGCCGCAAGC GGCCGGCGCG GCGGAGGCAG TGAACTCGAA ATATCGCGGC
GCTCAGGGGC TCGACCCCGA ATTCGTCAAG AGCCTGGAGA AGCAATTCGG CTTCGATAAG
CCGGCGCCGG AACGCTTCGC GATCATGCTG TGGAATTTCG CGCGGTTCGA TTTCGGCAAG
AGCTACTTCC GCGACGTCAG CGTGCTGCAA CTGATCAAGG AGAAGCTGCC GGTCTCGATG
TCGCTCGGGA TCTGGATGAC GCTGCTGACC TACCTGATCT CGATTCCGCT CGGCATTCGC
AAGGCGGTGC AGGACGGCTC CAAATTCGAC ACCTGGACCT CGGCGGTGAT CATCGTCGGC
TTCGCGATCC CAGGCTTCCT GTTCGCGATC CTGTTGATCA TCCTGTTCGC CGGCGGCTCC
TTCTTCAGCT GGTTTCCGCT CCGCGGCCTG ACCTCCGATG GCTGGAGCCA GTTTCCATGG
TACTGGAAGA TCCTCGACTA TTTCTGGCAC CTCACATTGC CGCTGATCTC GATGGCGCTG
GGGGCCTTCG CCACCATGAC GCTGCTGACC AAAAACTCGT TCCTGGACGA GATCCGTAAG
CAATACGTCA TGACTGCGCG CGCCAAGGGG TGCAGCGAGA CCCAGGTGCT GTACGGGCAC
GTGTTCCGCA ACGCCATGCT GATCGTGATC GCCGGCTTCC CTGGCGCCTT CATCCACGCG
TTCTTCTCCG GCGCGCTGTT GATCGAGACC ATCTTCTCGC TCGACGGGCT GGGCCTGCTC
GGCTTCGAGA GCGTGCTCAA CCGCGACTAT CCGGTGGTGT TCGGTACACT GTTCATCTTT
TCACTGGTGG GCCTGGTGGT GAACCTGATC TCCGATCTCA CCTATATGTG GATCGATCCG
CGGATCGACT TCGAGGCGCG GGACGTCTGA
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| Protein sequence | MAAYIARRIL LMFPTLLGIL FVSFVVVQFA PGGPVERVIA QISGADTGAS SRISGSSGGD
FGARPQAAGA AEAVNSKYRG AQGLDPEFVK SLEKQFGFDK PAPERFAIML WNFARFDFGK
SYFRDVSVLQ LIKEKLPVSM SLGIWMTLLT YLISIPLGIR KAVQDGSKFD TWTSAVIIVG
FAIPGFLFAI LLIILFAGGS FFSWFPLRGL TSDGWSQFPW YWKILDYFWH LTLPLISMAL
GAFATMTLLT KNSFLDEIRK QYVMTARAKG CSETQVLYGH VFRNAMLIVI AGFPGAFIHA
FFSGALLIET IFSLDGLGLL GFESVLNRDY PVVFGTLFIF SLVGLVVNLI SDLTYMWIDP
RIDFEARDV
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