Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4210 |
Symbol | |
ID | 6411894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4513189 |
End bp | 4514826 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642714092 |
Product | ABC transporter related |
Protein accession | YP_001993181 |
Protein GI | 192292576 |
COG category | [R] General function prediction only |
COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.355372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGCGA TCAACCAGCC TCTCCTGGAC GTCTCCGACC TGTCGGTGGC GTTTCACCAG CCCAGCGGGA CGACGACTGC CGTCGATCAT GTGTCGTTCC GGATCAAGCG CGGCGAGTGC GTCGCACTGG TCGGCGAATC CGGCTCGGGC AAGTCGGTCA GCGCGCTGTC GATCCTGAAG CTGCTGCCGT ATCCGAGCGC GTCGCATCCG TCCGGCCATA TCCGGTTCAA GGGGCACGAA CTGCTCGGGA TGTCCGAGCG CGAGATCCGC GGCATTCGTG GCAACGAGAT CTCGATCGTG TTTCAGGAGC CGATGACCTC GCTCAATCCG CTGCACACGA TCGAGGCCCA GATCGGCGAA ATCCTGCAGT TGCACGGCGG CGTGCGCGGC GCCAAGGCAC GGGCGCGGAT CATCGAGCTG CTGACCCAGG TTGGCATCCC CGAGCCGGAG ACACGTCTCG CCAGCTATCC GCATCAATTG TCCGGCGGGC AGCGCCAGCG CGTGATGATC GCGATGGCGC TCGCGAACGA GCCGGATCTG CTGATTGCCG ACGAGCCGAC CACGGCGCTC GACGTCACCG TGCAGGCGCA GATCTTGGCG CTGCTCGCCG ACATCCGCGC GCGGCTCGGG ATGAGCATGC TGTTCATCAC CCACGATCTC GGCATCGTCC GTCGTATCGC CGATACGGTG TGCGTGATGC ACACCGGCAA GATCGTCGAG CAGGGGCCGG TCGAACAAGT ATTCACCGAT CCGCAGCATC CCTACACCAA GGCGCTGCTT GCCGCCGAGC CGAAGCCCGA CCCGGCGCCG CCGTGTCCCG ATGCGCCGGT GGTGATCTCG ACGAACGATC TCAAGGTCTG GTTTCCGATC CGCCGTGGCC TGCTGCGCAA GACCGTCGGC CATATCAAGG CGGTCGACGG CGTGACGCTG GCGATCCGCA AAGGCGAGAC GCTCGGCGTG GTGGGCGAGT CCGGTTCGGG CAAGACAACG CTGGGACTGG CGCTGCTGCG GTTGATCTCG TCCGACGGGC CGATCGTGTT TCTCGGCAAG GATGTTCAGG GTCTGAAGTT CAAGCAGATG CTGCCGTTTC GCCGCGATAT GCAGATCGTG TTTCAAGACC CGTTCGGAGC GCTCAGCCCG CGCATGTCGG TCGGCGACAT CATTGCCGAG GGGCTGAGCG TGCATCAGCC GCAACTCGGC GAGTCCGAGC GCGAGGCGCG GGTGATCAAG GCGCTGAAGG ATGTCGGCCT CGATCCGGCG ACGCGCTTCC GCTATCCGCA CGAGTTCTCC GGCGGCCAGC GCCAGCGGAT TTCGATCGCG CGCGCGGTGG TGCTGGAGCC GAACTTCGTC GTGCTCGACG AGCCGACCAG CGCGCTCGAC ATGCTGTTTC AAGCCCAGAT GGTCGATCTG CTTCGCGAAC TGCAGCGCAA GCGCGACCTG ACCTACATGT TCATCTCCCA CGATCTGCGG GTGGTCGCCT CGCTCGCCAG TCATTTGATC GTCATGAAAC AAGGCAAAGT GGTCGAGGAA GGCCCCGCAG GCGAGCTATT CAAGTCTCCG AAGACCGATT ATACGCGGGC GCTGTTTGCC GCTGCGTTCC GGCTCGAGAC CGCGCCCGGC GGCGCTGCGG CTCAATAG
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Protein sequence | MDAINQPLLD VSDLSVAFHQ PSGTTTAVDH VSFRIKRGEC VALVGESGSG KSVSALSILK LLPYPSASHP SGHIRFKGHE LLGMSEREIR GIRGNEISIV FQEPMTSLNP LHTIEAQIGE ILQLHGGVRG AKARARIIEL LTQVGIPEPE TRLASYPHQL SGGQRQRVMI AMALANEPDL LIADEPTTAL DVTVQAQILA LLADIRARLG MSMLFITHDL GIVRRIADTV CVMHTGKIVE QGPVEQVFTD PQHPYTKALL AAEPKPDPAP PCPDAPVVIS TNDLKVWFPI RRGLLRKTVG HIKAVDGVTL AIRKGETLGV VGESGSGKTT LGLALLRLIS SDGPIVFLGK DVQGLKFKQM LPFRRDMQIV FQDPFGALSP RMSVGDIIAE GLSVHQPQLG ESEREARVIK ALKDVGLDPA TRFRYPHEFS GGQRQRISIA RAVVLEPNFV VLDEPTSALD MLFQAQMVDL LRELQRKRDL TYMFISHDLR VVASLASHLI VMKQGKVVEE GPAGELFKSP KTDYTRALFA AAFRLETAPG GAAAQ
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