| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4195 |
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| Symbol | |
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| ID | 6411879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4498701 |
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| End bp | 4499327 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642714077 |
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| Product | TadE family protein |
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| Protein accession | YP_001993166 |
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| Protein GI | 192292561 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4961] Flp pilus assembly protein TadG |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.615251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTTA GTTTCCAACG TCTTCTTCTT GCTCGATCGC TCGTGTTGCT GCGGCGGCTG
CAACGTGATC GCCGCGGCGT GGCCGCGATC GAATTCGCAA TCATCGTGCC GGTGATGCTG
GTGATGTTCC TCGCAACCGT CGAAGTCACC TCCGGTATCG CCGTCGATCG CAAGGTGACG
TTGGTCGCGC GAACCTTGTC GGACCTGGTG TCGCAGGCGA CCAGCGTCAC TGACAACGAC
CTCAAGAACG TCTTTGCTGC GAGCTACGGC GTGTTGACCC CGTATGCAGC TACTCCAGTC
AAAGCGACGA TCACCGAGAT CTTCGTCAAC AAGAACCAGG TTGCCACGGT GCAGTGGAGC
AAGACGGGGA CGGTGACGCA AAGTGGCGGC TCGGCCACCG CGACAGTGGC GAACTCAACG
CGGCAGGCGG GTGACACCAT CGCGATTCCG GACGGCCTCA AAGTCGCCAA CACCTATCTG
ATCCTGAGTG AAGTCAGCTA TCAGTATCAG CCGACGGTCG CGTACTTCAT TCCACAGGCT
GGCATCAGTC TGACGGACCA GTCCTACACG CGGCCTCGGC AATCGCTCTG TGTGCTGTAT
GGCACCACAA TGTGCCCGAC GAATTAA
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| Protein sequence | MRFSFQRLLL ARSLVLLRRL QRDRRGVAAI EFAIIVPVML VMFLATVEVT SGIAVDRKVT
LVARTLSDLV SQATSVTDND LKNVFAASYG VLTPYAATPV KATITEIFVN KNQVATVQWS
KTGTVTQSGG SATATVANST RQAGDTIAIP DGLKVANTYL ILSEVSYQYQ PTVAYFIPQA
GISLTDQSYT RPRQSLCVLY GTTMCPTN
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