| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4191 |
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| Symbol | |
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| ID | 6411875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4494556 |
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| End bp | 4495878 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642714073 |
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| Product | urea ABC transporter, urea binding protein |
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| Protein accession | YP_001993162 |
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| Protein GI | 192292557 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTATTG AAACCAAGCG ACTTGGAGCG ACCCCGATCA GCCGCCGCAA ATGGCTGGCC
GCGGCGGCCG GCCTGGCTTT GGGCCTGTCG GCGTTCGGAC CGGCCAAGGC GGCGGACGAC
ACCATCAAGG TGGGCGTGCT GCATTCGCTG TCCGGCACCA TGGCGATCAG CGAGACCACG
CTGAAGGACA CGGTGCTGTT TCTGATCGAC GAGCAGAACA AGAAGGGCGG CGTGCTCGGC
AAGAAGCTCG AGGCGGTGGT GGTCGATCCG GCGTCGAATT GGCCGCTGTT CGCCGAGAAG
GCCCGCGAGC TGATCACCAA GGACAAGGTC TCGGTGGTGT TCGGCTGCTG GACCTCGGTG
TCGCGCAAGT CGGTTCTGCC GGTATTCAAG GAGCTGAACT CGATCCTGTT CTACCCGGTG
CAGTACGAAG GCGAGGAGAG CGAGCGCAAC GTGTTCTACA CCGGCGCCGC GCCGAACCAG
CAGGCGATCC CGGCGGTCGA CTACCTCGCC AAGGAAGAAA AGGTCGAGCG CTGGGTGCTG
GCCGGCACCG ACTACGTCTA TCCGCGCACC ACCAACAAGA TCCTCGAAGC CTATCTGAAG
TCGAAGGGCG TCAAGTCCGA AGACATCATG ATCAACTACA CCCCGTTCGG TCACTCGGAC
TGGCAGACGA TCGTCGCCGA CATCAAGAAG TTCGGCTCGG CCGGCAAGAA GACCGCCGTG
GTCTCGACCA TCAATGGCGA CGCCAACGTG CCGTTCTACA AGGAGCTCGG CAACCAGGGC
ATCAAGGCCA CCGACATTCC GGTGGTGGCG TTCTCGGTCG GCGAAGAAGA GCTCGCCGGC
ATCGACACCA AGCCGCTGGT CGGCCATCTC GCCGCCTGGA ACTACTTCCA GTCGATCAAG
ACCCCCGAGA ACGAGCAGTT CATCAAGGAC TGGCAGGCCT ACACCAAGAA TCCGAAGCGC
GTGACCAACG ACCCGATGGA AGCCCATGTG ATCGGTTTCA ACATGTGGGT GAAGGCGGTC
GAGAAGGCCG GCTCGGTCGA TCCGGACAAG GTGATCGACG CGCTGCCGGG CACCAAGGCG
CCGAACCTGA CCGGCGGCAT CTCTGAAATG CTGCCGAACC ACCACATCAC CAAGCCGGTG
TTCATCGGCG AGATCAAGGC CGACGGCCAG TTTGACGTGG TGTGGAAGAC CCCGGGCCTG
GTGCCGGGCG ACGCCTGGTC GAAGGAGCTG GAAGGCTCGA AGGACCTGAT CGGTGACTGG
GTGACGCTGA AGTGCGGCAA CTACAACACC GTGACCAAGA AGTGCGGCGG CCAGGGCACC
TAA
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| Protein sequence | MRIETKRLGA TPISRRKWLA AAAGLALGLS AFGPAKAADD TIKVGVLHSL SGTMAISETT
LKDTVLFLID EQNKKGGVLG KKLEAVVVDP ASNWPLFAEK ARELITKDKV SVVFGCWTSV
SRKSVLPVFK ELNSILFYPV QYEGEESERN VFYTGAAPNQ QAIPAVDYLA KEEKVERWVL
AGTDYVYPRT TNKILEAYLK SKGVKSEDIM INYTPFGHSD WQTIVADIKK FGSAGKKTAV
VSTINGDANV PFYKELGNQG IKATDIPVVA FSVGEEELAG IDTKPLVGHL AAWNYFQSIK
TPENEQFIKD WQAYTKNPKR VTNDPMEAHV IGFNMWVKAV EKAGSVDPDK VIDALPGTKA
PNLTGGISEM LPNHHITKPV FIGEIKADGQ FDVVWKTPGL VPGDAWSKEL EGSKDLIGDW
VTLKCGNYNT VTKKCGGQGT
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