| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4190 |
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| Symbol | |
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| ID | 6411874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4492833 |
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| End bp | 4494446 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714072 |
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| Product | urea ABC transporter, permease protein UrtB |
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| Protein accession | YP_001993161 |
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| Protein GI | 192292556 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTCTCA TCCATCTGAC GCGCATTCTA TTTGCCGCAG TCGCGATCGC ATCCGTCACT
CTGGGGAGCC TGCCGGCGGT GGCCGGTCCC TATGAGGACG CCATCGCGCA ATTCGCCCAA
GATTCCTTCT CTGACAGCGA GGACGCGATC GGCAAGCTGG TCGCCAGCGG CAATCCGCGC
GCCGCGGTGA TCATCACCGC GCTGCAGGAC GGCAAGCTCT ACGCCGACCC GGACAGCAAA
GCGGCCTTCA TCAAGACCGA CGACGGTAAG ATCGCCAATG CGGCGACCGG CGAGGCGGTC
GGTGCGCTGC CGGCCAAGGC CAGCGCGGTG CGGCTCAACA ACAAGCTGCG CCGCGTCGTC
GCCGGCGCAA TGGCCGGCCT GACGCTGCTG TCGCCGGATC TCGACAAGCG GCTGCAGGCT
GCGCAATCGG TGTTCAAGTC GCACGACGAG ACCATGCTGC CGACCGTCGA GGCGGCGCTG
AAGGCGGAAA AGAACGCCGC CGCCAAGCGC GCCTTCACCG AAGCGCGGGC GTCGATCCTG
CTGTTCAAGC AGGGCGCCTC CGATGCCGAC AAGCTGGACG CGATCGCCAC CATCAAGGCG
CGCGGCGATC AGGAGGCGAT GGCGCTGCTC ACCGGCGCGC CTTCGAACCA GAGCGCCGCC
GTCGCCAGCG GCATCGCCGG CGCCAAGGCG GCGATCGAGC GCAATCTGGC GATCTGGTCG
ATGGTGCAGA ACGCCTGGTA TGGACTGTCG CTCGGCTCGG TTCTGCTGCT CGCCGCGATC
GGCCTCGCCA TCACCTTCGG TGTGATGGGC GTCATCAACA TGGCGCATGG CGAGATGGTG
ATGCTCGGGG CCTACACCAC CTTCGTGGTG CAGGAGGCGA TCCGCACGCG TTATCCGGCG
CTGTTCGACT ATTCTTTGTT GATTGCGGTC CCGCTCGCGT TCCTCGTTGC CGGCGCAGTC
GGCGTTCTGA TCGAACGCAC CGTGATCCGC TTCCTCTACG GCCGTCCGCT GGAGACCTTG
CTCGCCACCT GGGGACTGTC GCTGATCCTG CAGCAGGCGG TGCGCACGCT GTTCGGCCCC
ACCAATCGCG AGGTCGGCAA TCCGAGCTGG ATGAGCGGTG CGTTCGAACT CGGCGAGATG
ACCATCACTT ACAACCGGCT GTGGATCCTG TGCTTCACGC TGGCGGTGTT CGCCCTGCTG
CTGGCGATGC TGCGCTACAC CTCGCTCGGC CTGGAGATGC GCGCGGTGAC GCAGAACCGC
CGTATGGCCG CGTCGATGGG CATTGCCACG TCGCGGGTCG ACGCGCTGAC GTTTGGACTC
GGCTCCGGCA TCGCCGGCAT TGCCGGCGTG GCGCTGTCGC AGATCGACAA CGTCTCGCCG
AACCTCGGCC AGAGCTACAT CATCGACAGC TTCATGGTGG TGGTGTTCGG CGGCGTCGGA
AACCTGTGGG GCACGCTGGT CGGCGCCTTC TCGCTCGGCA TCGCCAACAA GTTCCTGGAG
CCGGTTGCCG GCGCCGTGCT CGGCAAGATC GCCATCCTGG TGCTGATCAT CCTGTTCATC
CAAAAGCGCC CCCGCGGCCT GTTCGCGCTC AAGGGCCGGG CGGTGGAGGC ATGA
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| Protein sequence | MPLIHLTRIL FAAVAIASVT LGSLPAVAGP YEDAIAQFAQ DSFSDSEDAI GKLVASGNPR
AAVIITALQD GKLYADPDSK AAFIKTDDGK IANAATGEAV GALPAKASAV RLNNKLRRVV
AGAMAGLTLL SPDLDKRLQA AQSVFKSHDE TMLPTVEAAL KAEKNAAAKR AFTEARASIL
LFKQGASDAD KLDAIATIKA RGDQEAMALL TGAPSNQSAA VASGIAGAKA AIERNLAIWS
MVQNAWYGLS LGSVLLLAAI GLAITFGVMG VINMAHGEMV MLGAYTTFVV QEAIRTRYPA
LFDYSLLIAV PLAFLVAGAV GVLIERTVIR FLYGRPLETL LATWGLSLIL QQAVRTLFGP
TNREVGNPSW MSGAFELGEM TITYNRLWIL CFTLAVFALL LAMLRYTSLG LEMRAVTQNR
RMAASMGIAT SRVDALTFGL GSGIAGIAGV ALSQIDNVSP NLGQSYIIDS FMVVVFGGVG
NLWGTLVGAF SLGIANKFLE PVAGAVLGKI AILVLIILFI QKRPRGLFAL KGRAVEA
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