| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4189 |
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| Symbol | |
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| ID | 6411873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4491485 |
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| End bp | 4492660 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642714071 |
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| Product | urea ABC transporter, permease protein UrtC |
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| Protein accession | YP_001993160 |
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| Protein GI | 192292555 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCGC ACATCCTTAC CCGCTCGCTG GATCGCGGGG CGACGGTCTT CCTGGTGCTG
CTCGCCGCCA TCGGAATCCT GCTGCCGCTG CTCAATCTGC TGACGCCGGA GTCTTCGGCG
CTGCATGTGC CGACCTATCT GATCTCGCTG TTCGGCAAAT ATGTCTGCTA CGCGCTGCTC
GCGCTCTCGA TCGATCTGAT CTGGGGCTAT TGCGGCATCC TCTCGCTCGG CCATGGCGCG
TTCTTCGCAC TCGGCGGCTA CGCGATGGGC ATGTATCTGA TGCGCCAGAT CGGCACTCGC
GGTGTCTATG CCAATCCGAC CCTGCCGGAC TTCATGGTGT TCCTGAACTG GAAGGAACTG
CCCTGGTATT GGTACGGCTT CGACATGTTC TGGTTCGCGG CGGTGATGGT GCTGCTGGTG
CCGGGCCTGC TCGCCTTCTG CTTCGGCTGG CTGGCGTTCC GCTCCCGCGT CACCGGCGTG
TATCTGTCGA TCATTACGCA AGCGATGACC TATGCGCTGC TGCTGGCGTT CTTCCGCAAC
GATTTCGGTT TCGGCGGCAA TAACGGCCTG ACCGATTTCA AGGACATCCT CGGCTTCAAC
GTGCAGGCCG ACGGCACCCG CGCGGCGCTG TTCATGCTGA GCTGTCTGGC GCTGGCGATC
GGCTTCTTCA TCTGCCGGGC TGTCGTCACT TCCAAGCTCG GCAAGGTGCT GATCGCGATC
CGCGATGCCG AAAGCCGCAC CCGGTTCCTC GGCTATCGCG TCGAGTCCTA CAAGCTGTTC
GTGTTCACGC TGTCGGCCTG CATGGCCGGC GTCGCGGGCG CGCTGTACGT GCCGCAGGTC
GGCATCATCA ATCCGAGCGA GTTCGCCCCC GGCAATTCGA TCGAGGCGGT GATCTGGGTT
GCGGTGGGCG GTCGCGGCAC GCTGGTCGGC GCCGCGCTCG GCGCGATCGT CGTCAACTAC
GCCAAGACCG TGTTCACCTC CGGGCCGCTG GCGCCGTATT GGCTGTTCAT GCTCGGCGCG
TTGTTCGTGG CGGTGACCCT GCTGCTGCCG AAAGGCATCG TCGGCACCGT CAATGCCTGG
CTGGACTCGC GCAAACTGCC GCCGACCGAC GCAGCCGACA GTGCGGCGCG TGAAGACGGC
GTGATCGAAC CGAAAGCTGG CGGAGTGACG TCATGA
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| Protein sequence | MTPHILTRSL DRGATVFLVL LAAIGILLPL LNLLTPESSA LHVPTYLISL FGKYVCYALL
ALSIDLIWGY CGILSLGHGA FFALGGYAMG MYLMRQIGTR GVYANPTLPD FMVFLNWKEL
PWYWYGFDMF WFAAVMVLLV PGLLAFCFGW LAFRSRVTGV YLSIITQAMT YALLLAFFRN
DFGFGGNNGL TDFKDILGFN VQADGTRAAL FMLSCLALAI GFFICRAVVT SKLGKVLIAI
RDAESRTRFL GYRVESYKLF VFTLSACMAG VAGALYVPQV GIINPSEFAP GNSIEAVIWV
AVGGRGTLVG AALGAIVVNY AKTVFTSGPL APYWLFMLGA LFVAVTLLLP KGIVGTVNAW
LDSRKLPPTD AADSAAREDG VIEPKAGGVT S
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