| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4188 |
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| Symbol | |
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| ID | 6411872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4490724 |
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| End bp | 4491488 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642714070 |
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| Product | urea ABC transporter, ATP-binding protein UrtD |
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| Protein accession | YP_001993159 |
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| Protein GI | 192292554 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
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| TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATGC TCGAAACCCG CTCGACCTCG GCGATGCTGT ATCTCGACGG CGTCCATGTC
TCGTTCGACG GCTTCCACGC CATCAACAAC CTGTCGCTCA CGCTGGAGCC CGGCGAGATG
CGGGCGATCA TCGGCCCGAA CGGTGCCGGC AAGACCACGA TGATGGACAT CATCACCGGC
AAGACCAAGC CGGACAAAGG CGAGGTGGTG TTCGACGGTA CTGTCGACCT CACCAAGCTG
GACGAGACCG AGATCGCCAA GCTCGGCATC GGTCGCAAAT TCCAGAAGCC GACGGTGTTC
GAAAGCCAGA CCATCGAGGA CAATCTGCTG CTTGCGCTCA ATGTCGACCA CAGCGTCCGC
GGCACGCTGT TCTGGCGGCG GAGCAGGGAC GAGAGCGAGC GGATCGAGCG CGTGCTCGAC
ATCATCCGCC TGCGCGACGC CCGCGACCGG CTCGCCGGCT CGCTGTCGCA CGGCCAGAAG
CAGTGGCTGG AGATCGGCAT GCTGTTGGCG CAGGACCCGA AGGTGCTGCT GGTCGACGAA
CCGGTCGCCG GCATGACCGA CGTCGAGACC CAACAGACCG CGGAGCTGCT GCGAGAGATC
AACAGTCACG ACAAGACCGT GATGGTGGTC GAGCACGACA TGACCTTCGT GCGCGAACTC
GGCGTCAAGG TGACGTGCCT GCACGAAGGC GCCGTGCTGG CCGAAGGCAC GATCGACGAC
GTCTCGGCCA ACGAGCGCGT CGTCGAAGTG TATCTGGGGC GGTGA
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| Protein sequence | MSMLETRSTS AMLYLDGVHV SFDGFHAINN LSLTLEPGEM RAIIGPNGAG KTTMMDIITG
KTKPDKGEVV FDGTVDLTKL DETEIAKLGI GRKFQKPTVF ESQTIEDNLL LALNVDHSVR
GTLFWRRSRD ESERIERVLD IIRLRDARDR LAGSLSHGQK QWLEIGMLLA QDPKVLLVDE
PVAGMTDVET QQTAELLREI NSHDKTVMVV EHDMTFVREL GVKVTCLHEG AVLAEGTIDD
VSANERVVEV YLGR
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