Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4179 |
Symbol | |
ID | 6411863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4483770 |
End bp | 4484492 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642714061 |
Product | Urease accessory protein UreF |
Protein accession | YP_001993150 |
Protein GI | 192292545 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0830] Urease accessory protein UreF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACTG AGCCGGAGGC GTCGGCGCAG CCGCTGCCCG CACAGCAGAG CGCGGCGCTG TTCCGGCTGA TGACCTGGCT GTCGCCGGCG TTCCCGGTCG GCGCGTTCTC TTATTCCAGC GGCATCGAAT GGGCGGTGGA GGCCGGCGAC GTCGAAGGCG CCGCCAGTTT GCGCGATTGG CTCGACGCGA TGCTGCAGCA TGGCGCCGGA TTCTGCGACG CGGTGCTGCT CTGCCATGCC TACCGCGCCA CCGAGCGACA TGACGACGCC GGCCTGCTAG CCGTCGCCGA ACTCGCCGCG GCGCTCGTGA CTTCGGCGGA GCGCCAGCTC GAGACGCTGT CGCAGGGCCG CGCCTTTATC GAGATCGCCC GCAAGGCATG GAACAGCGAC GGCCTCGGCC GCGCCGTGGC AGCATGCGGC GAGGCGATCG CCTATCCGGT CGCGGTCGGC GTGGTCAGCG CATCGCACGG CGTGCCGCTG CCGGCGACGC TGCACGGCTT CCTGCACGCG GTGACGTCGA ACTGGATCTC GGCGGGCGCG CGGCTGATCC CGCTCGGCCA GACCGACAGC CAGCGCGTGC TCGCCGCGCT GGAGCCATCG GTGATCGCGA CGGGCACGCG AGCGCTGACC GCGTCGCTCG ACGACCTCGG CACCGCCACC TTCCGCGCCG ATCTCGCCAG CCTGCGCCAC GAGACGCAGT ACACGCGGCT GTTTCGGTCG TAA
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Protein sequence | MSTEPEASAQ PLPAQQSAAL FRLMTWLSPA FPVGAFSYSS GIEWAVEAGD VEGAASLRDW LDAMLQHGAG FCDAVLLCHA YRATERHDDA GLLAVAELAA ALVTSAERQL ETLSQGRAFI EIARKAWNSD GLGRAVAACG EAIAYPVAVG VVSASHGVPL PATLHGFLHA VTSNWISAGA RLIPLGQTDS QRVLAALEPS VIATGTRALT ASLDDLGTAT FRADLASLRH ETQYTRLFRS
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