| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4172 |
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| Symbol | |
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| ID | 6411856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4477257 |
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| End bp | 4478138 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642714054 |
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| Product | Ku protein |
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| Protein accession | YP_001993143 |
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| Protein GI | 192292538 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1273] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02772] Ku protein, prokaryotic |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.411787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCGCG CCTACTGGAA GGGCACGCTG AAGCTGTCCC TCGTCACATG CCCGGTGGCG
CTGTATCCGG CCACGACCAG TGTCGAGAAG ACGCGCTTCC ACATGATCAA TGCGGAGACC
GGCAACCGGC TGAAGCAGCA GATGATCGAC GAGGACACGG GTGACGTCGT CGAGAAGGAT
CAGAAGGCCC GCGGCTACGA GGTGCGCAAG GGCAAGTACA TCGAGATCGA AAAGGACGAA
CTCGAAGCGG TGCAGATCGA GAGCACCCAC ACCATCGACA TCGACAGCTT CGTGCCGGCC
GACGAAATCG ACCAACGCTT TCTCAATCAT CCCTATTACA TCGTTCCCGA CGGCAAGGCC
GGCACCGACG CCTTCGCGGT GATCCGCGAC GCGATGAAGG ACAAAGGCCG TGTCGCGCTC
GGCCGCATCG TCCTCACCAA CCGTGAGCAT GTGCTGGCGA TCGAGCCGTT CGGCAAGGGC
TTGTTGGCGA CAACGCTGCG CTACCCTTAC GAGCTGCGCG ACGCCGACGA ATATTTCGAC
AGCATCAAGT CGCCGAAGAT CTCCAAGGAC ATGGTCGAAC TCGCCGGCCA CATCCTCGAT
ACCAAGGCGG CGCATTTCGA GCCGAAGAAG TTCAGGGACG AATACGAGAC CGCGCTGAAG
GCGCTGGTCA AGCGCAAGGC CGCCGGCAAG TCGATCAAGC TCCCCGAACC CGAGGAAAAG
GACAGCAACG TCGTCAGCCT GATGGACGCG CTGAAGCAGA GCCTGGAAGG CGGCAAGTCC
GGCAGCAAGA CCGGCAAGGC TCACGGCCGC CGCAAAGCCT CCCGCTCCTC CGCCCGCACG
AAAGCCCGCC GCTCCACCGC GCGGCAGCGC AAGGCGGGGT GA
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| Protein sequence | MPRAYWKGTL KLSLVTCPVA LYPATTSVEK TRFHMINAET GNRLKQQMID EDTGDVVEKD
QKARGYEVRK GKYIEIEKDE LEAVQIESTH TIDIDSFVPA DEIDQRFLNH PYYIVPDGKA
GTDAFAVIRD AMKDKGRVAL GRIVLTNREH VLAIEPFGKG LLATTLRYPY ELRDADEYFD
SIKSPKISKD MVELAGHILD TKAAHFEPKK FRDEYETALK ALVKRKAAGK SIKLPEPEEK
DSNVVSLMDA LKQSLEGGKS GSKTGKAHGR RKASRSSART KARRSTARQR KAG
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