| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4168 |
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| Symbol | |
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| ID | 6411852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4470404 |
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| End bp | 4473190 |
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| Gene Length | 2787 bp |
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| Protein Length | 928 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714050 |
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| Product | malto-oligosyltrehalose synthase |
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| Protein accession | YP_001993139 |
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| Protein GI | 192292534 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3280] Maltooligosyl trehalose synthase |
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| TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.487417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCCTG CGATACCCAC TGCCACCTAT CGCCTGCAAC TCACCGCTGA TTTTGGATTC
GACGCCGCCA CGGCGATTGT CCCCTATCTG AAACGGCTCG GCATTTCGCA CGTCTATGCC
TCGCCGTTCA TGAAAGCCCG CAAGGGCTCG ACCCACGGCT ACGACATCGT CGACCACACC
AAGCTCAATC CTGAGCTCGG CGGCGAAGAG GGGTTCGCCC GCCTCAGCGC CGCACTGAAA
CAGCACGACA TCGGCCTGAT CCTCGACTTC GTGCCCAATC ATGTCGGCGT GCACTATGCC
GACAATCCGT GGTGGCTCGA CGTGCTGGAA TGGGGTCCGG CCTCGCCGCA CGCCGCATCG
TTCGACATCG ATTGGGAGAT GCTGCCGTTC CGCGCCCGCG GCGGCGTGCT GCTGCCGATC
ATCGGCTCGT CCTACGGCAA GACGCTGGAA GCCGGCGAGA TCGAGCTGCG CTATGACGCC
GCCGACGGCA GCTTCTCGGC GTGGTACTAC GAACACCGGC TGCCGATCGC GCCGCAGCGC
TACAGCGAGA TCCTGCGCAC CATCGTGCGC GAGGCCGGCG CGGAGAACAG CGACGCGGGT
CGCGCGATCC TCGACCTCGC CGCGCGCTAC ACCGGACTGG GCCATCCGTC GCGAAAGGAA
GCACCCGAGT TCAAGGCGGC GCTGCAAGCG ATCCCCGGCG CCGCCGAGGT AATCACGCGC
GGGCTCAACG CTTACCGGGC CGGCGAGGGC CGCATCCAGC AGATCCAGGC GCTCCACAAT
CTTTTGGAGC GCCAGCACTA CAAGCTCGGC CATTGGCAAC TGGCGTCGAG CGAGATCAAC
TATCGCCGGT TCTTCGACGT CAACACCCTC GCCGGCTTGC GGGTCGAAGA CGCCGGCACC
TTCGAGGCGA TCCACAGCCG GGTGAAGAAG CTGCTGGCCG ACGGCCAGTT GCAGGGCCTG
CGCCTCGATC ACATCGATGG CCTGCGCGAT CCGGCGCAGT ACTTCCAGCG GCTGCGTCGG
CTGGCGCGGG ACGCGCAGGG CGCGGGTGCT CCGCCGCTCT ACACCGTGAT CGAGAAGATC
CTCGGCGAAG GCGAAGCGCT GCACCGCTTC GCCGGCGTCC ACGGCACCAC CGGCTATGAA
TGGCTCAACG TCATCACCCG CGTGCTGCTC GACGGCCGCG GCCTGAAGCC GCTGGACGAA
ACCTGGCGGC AGGCCAGCAA CCTGTCGCCC GCATTCGATC CGGTGCTCAA GGCCGCCAAG
CGCCGCGTGC TGGAAACGCT TCTGCTCAGC GAATTCACCG TGCTGACACG TCTGCTAGCA
CGGATCGCCT CCGGCCACTA CTCGACCCGG GATTTTTCCG CCGACAATCT GCGGCAGGTG
TTCGAGCTCT ACGTGCTGCA CTTCCCGGTG TATCGCACCT ACCTGACCGG CAACAGCCCG
ACCCAGCTCG ACCGCAAGCT GATCGAAGAC ACCATCGCCA AGGCGCGGGC CGACTGGTTC
GGCGCCGACG ACGGCATCTT CGAATTCCTC AAGGATGTGC TGACGATGGA CCTGGTGAAG
CCGGGCCGCG CGCTGCATTC CAAGCCGCGG GTGCGCCGGT TCGCGCTGAA GGTGCAGCAG
TTCACCGGGC CGACCATGGC CAAGTCGCTG GAGGACACCG CGTTCTATCG CTATCACCGG
CTGCTCGCGC TCAATGAAGT CGGCGGCGAT CCGGCCGCGC CGGAGATGCC GATCGCGGCG
TTTCACGACG CGATGCAGAG CCGCGCCAAG GACTGGCCGC ACGGCATGAC CGCGACGATG
ACGCACGATG CCAAGCGCGG CGAAGATGCG CGCGCGCGGC TGTTGTCGCT CGCCGAGATC
CCCGGCGAGT GGGCGAGCGC GGTCGGCAAA TGGAAGCTGC TCAACGCGCC GCATCTGGTC
GTCGACGGCG ACATGCGCGC GCCTTCGCCG GCGTTCGAAT ACATGCTGTA CCAGGCCCTG
ATCGGTGCAT GGCCGCTGTC ACCCGATCCA GATTTCACCG ACCGCTTCCA GGGCTTCGCG
CTGAAGGCAG CGCGCGAAGG CAAGCAGGAA ACTAACTGGC TCAACCCCAA CCTCGCCTAT
GAGGAAGGCA TTCGCATCTT CATCGATCGC CTGCTCGATC CGAAGCTGTC GGGCCCGTTC
CTGGAATCGG TCGACAGCCT GCACCGACGG CTGTCGCTGC TCGGCGCTTT GAACGGCCTC
AGCCAGCTGA CGTTGAAGGC GACGATGCCC GGCGTCCCCG ATTTCTATCA GGGCACCGAG
TTCTGGGACT TCTCGCTGGT CGATCCCGAC AACCGCCGCC CGGTTGATTT CGACGCGCGT
GCAGCGGCGC TGGAGTCATT GGACGACAAG CCGGACTGGA AAGCCCTGAC TGCGAAGTGG
AGCGACGGCC GCGTCAAGCT GGCCTGGACG CACCATCTAC TCAAGCTGCG CCGCGACCAC
GCCGCGTTGT TCAGTGACGG CGACTACCGG CCGCTGGCAG TGAAGGGCGC ACACCGCGAC
CACATCGTCG CCTTCGCCCG CACCAGCGGC AGCGAGGCGG TGATCGTCGT CGTGGCAAAG
GGCCTCGCTG CGTTATCCGA TGAAGGCCGG CAATGGCCAA CCGGCGATGC GTTCGACGGC
GCGATCGAGA CCAAAGGCTA CGCCGTGGAA ATCGGCGACG GCGAGACCAC GTCTGGCGAG
TTGCAGCTCC GCGACCTGTT CCGCCACCTC CCTGTCTCCG TGCATCGCGC GCGTCTCACA
GGCGCGAAGC GAGTCCGGCG GGGCTGA
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| Protein sequence | MPPAIPTATY RLQLTADFGF DAATAIVPYL KRLGISHVYA SPFMKARKGS THGYDIVDHT
KLNPELGGEE GFARLSAALK QHDIGLILDF VPNHVGVHYA DNPWWLDVLE WGPASPHAAS
FDIDWEMLPF RARGGVLLPI IGSSYGKTLE AGEIELRYDA ADGSFSAWYY EHRLPIAPQR
YSEILRTIVR EAGAENSDAG RAILDLAARY TGLGHPSRKE APEFKAALQA IPGAAEVITR
GLNAYRAGEG RIQQIQALHN LLERQHYKLG HWQLASSEIN YRRFFDVNTL AGLRVEDAGT
FEAIHSRVKK LLADGQLQGL RLDHIDGLRD PAQYFQRLRR LARDAQGAGA PPLYTVIEKI
LGEGEALHRF AGVHGTTGYE WLNVITRVLL DGRGLKPLDE TWRQASNLSP AFDPVLKAAK
RRVLETLLLS EFTVLTRLLA RIASGHYSTR DFSADNLRQV FELYVLHFPV YRTYLTGNSP
TQLDRKLIED TIAKARADWF GADDGIFEFL KDVLTMDLVK PGRALHSKPR VRRFALKVQQ
FTGPTMAKSL EDTAFYRYHR LLALNEVGGD PAAPEMPIAA FHDAMQSRAK DWPHGMTATM
THDAKRGEDA RARLLSLAEI PGEWASAVGK WKLLNAPHLV VDGDMRAPSP AFEYMLYQAL
IGAWPLSPDP DFTDRFQGFA LKAAREGKQE TNWLNPNLAY EEGIRIFIDR LLDPKLSGPF
LESVDSLHRR LSLLGALNGL SQLTLKATMP GVPDFYQGTE FWDFSLVDPD NRRPVDFDAR
AAALESLDDK PDWKALTAKW SDGRVKLAWT HHLLKLRRDH AALFSDGDYR PLAVKGAHRD
HIVAFARTSG SEAVIVVVAK GLAALSDEGR QWPTGDAFDG AIETKGYAVE IGDGETTSGE
LQLRDLFRHL PVSVHRARLT GAKRVRRG
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