| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4165 |
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| Symbol | |
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| ID | 6411849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4464172 |
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| End bp | 4466322 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642714047 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_001993136 |
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| Protein GI | 192292531 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTGC AATTGAGCGA CGAAGCCTAC GCAGTTGTCG AAGGCCGTCA TGCCGATCCA
TTCCGCTATC TCGGCGCACA CCCTGAGGAT GGCGCCACCA TGGTGCGCGT GCTGCTGCCG
GATGCCGTTG CGGTCGAGGT GATCGGCGAC AATGGCCACG TCGCGCCGCT CGACCAGGCG
CATCCGGCCG GCCTGTTCGT CGGACCTCTG CCCGGCGCTT CGCCGCGCTA CACGTTGCGC
GCACGGTTCG GCGACACCAC GGTCGAGCTG CAGGACCCCT ACCGCTTCCC GCCGATCCTC
AGCGATTTCG ATCTTTACCT GCTCGGCGAA GGCTCCGACC AGCGGCTTTA CGACAAGCTT
GGCGCCCATC CGATGGAGCT GGAAGGTGTC GCCGGCGTCG GTTTCGTGGT GCTGGCGCCG
AACGCGCGCC GCGTCAGCGT GGTCGGCGAT TTCAATTTTT GGAATCCGCT GCGCCACCAG
ATGCGGGTGC GCGGCAACGG CTATTGGGAG CTGTTTGTCC CGGGCGCCCG AGCCGGCGAT
CACTACAAGT TCGATCTCGC CGGACCGAAC GGCGAACAAC TGCCGCAGAA GGCCGACCCG
TTGGCATTCG CCGCCGAGCT GCGGCCGAAG ACCGCCTCGA TCGTGGTCGA CGCCACCACA
CTGTCGCGAC CGCGGCCGGC GCCGGAGAAC ATCAACGCGC TGTCGGCGCC GATGTCGATC
TACGAGGTGC ATCTCGGCTC GTGGCGCCGC AAGGAAGGCG ACCAGTGGCT GACCTATCGC
GAACTCGCCG AGCAACTGCC GGCCTATGTC CGCGACATGG GCTTTACCCA CGTCGAATTC
CTGCCGGTCA GCGAGCATCC GTTCGACGGC TCGTGGGGCT ATCAGCCGAC CGGCCTGTAC
GCGCCGACCT CACGCTTCGG CTCGCCTGAG GATTTCTGCG CGCTGGTCGA CGCCTGCCAT
GCCGCGGGCA TCGGCGTGAT CCTCGACTGG GTGCCGGGCC ATTTCCCGGA CGATCCGCAC
GGCCTCGGCA ATTTCGACGG CACAGCGCTG TACGAGCACG CCAACCCGAT GCAAGGGCGG
CATCTCGACT GGGGCACGCT GATCTACAAT TACGGGCGAA CCGAGGTCGT CAATTTCCTC
ACCGCGAACG CGCTGTTCTG GCTGGAGCGT TACGGCATCG ACGGGCTGCG CGTCGATGCG
GTGGCCTCGA TGCTGTACCT CGATTACAGC CGCCCGGCCG GCGGCTGGAT CCCGAACAAA
TTCGGCGGCC GTGAGAACAT CGAGGCGATC GACTTCATTC GCCGCTTCAA CACTGAAGTG
TACGGCAAAT TCCCGCACGC CACCACCGCA GCGGAGGAAT CCACCGCCTG GCCGCAGGTG
TCGCGCCCGA TCGAATTCGG CGGGCTCGGA TTCGGCTACA AGTGGAACAT GGGGTGGATG
CACGATACGC TGAACTACAT CAGCAAGGAT CCGATTCACC GCAAATATCA TCACGGCCAG
ATCCTGTTCG GACTGCACTA CGCGTTCTCG GAGAATTTCA TTCTGCCGCT GTCGCACGAC
GAGGTCGTTC ACGGCAAACG CTCGATCCTC GGCCGGATGC CGGGCGATGA GTGGCAACGC
TTTGCGAATC TACGCGCCTA CTATGCGTTC ATGTTCGGGC ACCCCGGCAA GAAGCTGCTG
TTCATGGGCA GCGAGTTCGG CCAGGAGCGC GAATGGAGCC ACGATCGCTC GCTCGACTGG
CATCTGCTGG AATATCCGAA ATATTCCGGC ATCCAGGCGT TGCTGCGCGA CCTCAACAAG
CTGTACAGGT CGCTGCCGGC GCTGCATCAG CTGGATTGCG ATCCGTTCGG CTTCGAATGG
CTGATCACCG AAGACGCCAA TCGCAACGTG TTCGCCTGGA TGCGCAAGGG CAACGATACC
CGCGCCCGCT GTCTGGTGAT CGTCAACTTC TCACCGAACG TCTACCAGGA CTATCGCGTC
CGCGTGCCGT TCCCCGGTCG CTGGCGCGAA GTGTTCAATT CGGACTCGGC CGGCTACGGC
GGCAGCAATG TCGGCAATGG CGGCGAAGTC CGCACCCTGG AGGGTCTGGT GCCTGAGCTG
AGCCTGACGA TCCCGCCGCT GGCCGCGATC TTCCTGACGC CGGAGGATTG A
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| Protein sequence | MTVQLSDEAY AVVEGRHADP FRYLGAHPED GATMVRVLLP DAVAVEVIGD NGHVAPLDQA
HPAGLFVGPL PGASPRYTLR ARFGDTTVEL QDPYRFPPIL SDFDLYLLGE GSDQRLYDKL
GAHPMELEGV AGVGFVVLAP NARRVSVVGD FNFWNPLRHQ MRVRGNGYWE LFVPGARAGD
HYKFDLAGPN GEQLPQKADP LAFAAELRPK TASIVVDATT LSRPRPAPEN INALSAPMSI
YEVHLGSWRR KEGDQWLTYR ELAEQLPAYV RDMGFTHVEF LPVSEHPFDG SWGYQPTGLY
APTSRFGSPE DFCALVDACH AAGIGVILDW VPGHFPDDPH GLGNFDGTAL YEHANPMQGR
HLDWGTLIYN YGRTEVVNFL TANALFWLER YGIDGLRVDA VASMLYLDYS RPAGGWIPNK
FGGRENIEAI DFIRRFNTEV YGKFPHATTA AEESTAWPQV SRPIEFGGLG FGYKWNMGWM
HDTLNYISKD PIHRKYHHGQ ILFGLHYAFS ENFILPLSHD EVVHGKRSIL GRMPGDEWQR
FANLRAYYAF MFGHPGKKLL FMGSEFGQER EWSHDRSLDW HLLEYPKYSG IQALLRDLNK
LYRSLPALHQ LDCDPFGFEW LITEDANRNV FAWMRKGNDT RARCLVIVNF SPNVYQDYRV
RVPFPGRWRE VFNSDSAGYG GSNVGNGGEV RTLEGLVPEL SLTIPPLAAI FLTPED
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