| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4163 |
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| Symbol | |
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| ID | 6411847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4458907 |
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| End bp | 4460862 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642714045 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001993134 |
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| Protein GI | 192292529 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACAAGT CGACACAAAC GCTTCAGGCC GCCGCTCATG GCGGCGCTTT TCACATCGAA
GACATCTATC CGCTGATCGA CGGCGGACGC TTTGCGGTGA AGCGGATCGT CGGCGAGCCG
ATTGAGGTTT GGGCTGACAT TTATCGCGAC GGCCATGAGG TCATCGCCGC GGCCTTGATC
TGGCGACGCG AGCAGGACAG CGCCTGGCAA CGCGTGCCGA TGACGCATGT CGTCAACGAT
CGCTGGTCGG CGACCTTCAC GCCGCAGCAG CTCGGCCGTC ACGTTTATGC GATCGAAGCC
TGGACCGACG AATTCGCAAC TTGGCGCCAC GGCGCCGAGC TCAAGCTGAA GGCTGGCCAG
GATCTATCGC TCGAAGCACT CGAAGGCGCG GGCCTGCTGA CCAAGGCACA AACCGACGAT
CCAGAAGTGC TGCGGCTGAT TCAGCAGCGC TGCGAAGAAT ATCTACGGAC CGGTGATATC
ACGCCGCTGC TCTCGCCGGA ATTGCGCGAC GCGATGGCAA CCAGTCAGGT GCGGCAAGAC
CTCACCCGCA CCGATCCGCT GCCGCTGACG ATCGACCGGC CGCGTGCCCG CTACGGCGCC
TGGTACGAGA TGGTGCCGCG CAGCCAGAGC TCCGAGCCCG GCCGCCACGG CACCTTCCGC
GACTGCATCG CCCGGCTGCC GGACGTCGCC GCGATGGGCT TCGACGTGGT GTATTTCACC
CCGATCCATC CGATCGGCGC CACCAACCGC AAGGGCCGCA ACAACGCGCT GAAGGCCGAG
CCCGGCGATC CGGGCAGCCC CTATGCGATC GGCGCCGAGC ACGGCGGACA TGATGCGATT
CACCCGGAGC TCGGCACGCT GGCAGACTTC CGCGCCTTTA TCGATGCCTG CGAGGTCGTC
GGCATCGAGG TTGCGCTCGA CATCGCCGTG CAGTGCTCGC CGGATCATCC GTGGCTGAAG
CAGCATCCGG ACTGGTTCAA GCGCCGTCCC GACGGCTCGA TGAAATACGC CGAGAATCCG
CCGAAGAAAT ACGAAGACAT CGTCAACCCG GACTTCTCCT GCGAAGACGC CGGTTCGCTG
TGGAACGCGC TGCGCGACGT CATCCTGTTC TGGGCCGAAC AGGGTGTGAA GATTTTCCGG
GTCGACAATC CCCACACCAA ACCGCTGCGG TTCTGGGAAT GGCTGATCCG CGAGGTGCAG
CTTCGTCACC CCGACGTCAT CTTCCTGGCT GAAGCCTTCA CCCGCCCGAA ACTGATGAAG
GGACTGGCCA AGCTCGGCTT CACCCAGTCC TATACTTACT TCACCTGGCG TACCCAGAAG
TGGGAGATCG AGCAATATTT GCGCGAGCTT ACCGACTATC CCGAACGCGA CTTCTACCGG
CCGAACTTCT TCACCAATAC GCCGGACATC CTGCCCTTCC ACCTGCAGGG CGGCGAACCG
TGGATGTTCA AGTCGCGCCT CGTTCTCGCC GCAACGCTGT CATCGACCTA TGGCATCTAC
AACGGCTTCG AGCTGCTCGA GCACGAGCCG ATCCCCGGCA AGGAAGAGTA TCTCGATTCC
GAAAAATACG AGATCAAGGT GCGCGACTGG GACAAGCCGG GCAACATCAA GCCTTACATT
CGCGACATCA ACCGCATCCG CGCCGCCAAC CCGGCCTTGC AGCAGACCAG CAATCTTCGC
TTCCTCGAGG TGCAGGACCC GAATGTGACC GGCTTCGTCA AGACATCGGT CGACGGCACC
AGTGCGGTCG CGGTGGCGAT CGCGCTCAGC AGCGACTACC ATGAATTCTG GCTACCGCTC
GGCGACGTCC AGATCGAGGT TGCCGGCGAG CGACGACCGG TCGTTGCGGT CGAGAACTTG
CTGACTGGCG AGCGCCACGC GCTCGATTGG GGCGGGATCA ACCTGCGGAT CGATCCGCAT
CGTGACCCGG CGCTGCTGTT CCGTTGCCTG GCGTGA
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| Protein sequence | MNKSTQTLQA AAHGGAFHIE DIYPLIDGGR FAVKRIVGEP IEVWADIYRD GHEVIAAALI
WRREQDSAWQ RVPMTHVVND RWSATFTPQQ LGRHVYAIEA WTDEFATWRH GAELKLKAGQ
DLSLEALEGA GLLTKAQTDD PEVLRLIQQR CEEYLRTGDI TPLLSPELRD AMATSQVRQD
LTRTDPLPLT IDRPRARYGA WYEMVPRSQS SEPGRHGTFR DCIARLPDVA AMGFDVVYFT
PIHPIGATNR KGRNNALKAE PGDPGSPYAI GAEHGGHDAI HPELGTLADF RAFIDACEVV
GIEVALDIAV QCSPDHPWLK QHPDWFKRRP DGSMKYAENP PKKYEDIVNP DFSCEDAGSL
WNALRDVILF WAEQGVKIFR VDNPHTKPLR FWEWLIREVQ LRHPDVIFLA EAFTRPKLMK
GLAKLGFTQS YTYFTWRTQK WEIEQYLREL TDYPERDFYR PNFFTNTPDI LPFHLQGGEP
WMFKSRLVLA ATLSSTYGIY NGFELLEHEP IPGKEEYLDS EKYEIKVRDW DKPGNIKPYI
RDINRIRAAN PALQQTSNLR FLEVQDPNVT GFVKTSVDGT SAVAVAIALS SDYHEFWLPL
GDVQIEVAGE RRPVVAVENL LTGERHALDW GGINLRIDPH RDPALLFRCL A
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