| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4160 |
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| Symbol | |
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| ID | 6411844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4454118 |
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| End bp | 4454936 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714042 |
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| Product | Cof-like hydrolase |
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| Protein accession | YP_001993131 |
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| Protein GI | 192292526 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.183104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGCA TCCAGCTCGT AATCTCCGAC GTCGATGGCA CCCTGGTCAC CACCGACAAG
CGGCTCACCG ACCGCGCCCG TGACGCGGTG TCGAGATTGG AAGCCAGCGG CGTCGGATTC
ACGCTGACTT CAAGCCGGCC GCCGGTCGGG ATGCGGATGT ACAGCGATCC GCTCGGCATC
ACGCTGCCGC TCGGCCCATT CAATGGCAGC TCGATCGTCA CCCCGACGCT CGACGTGCTC
GAACAGCATC TGATCCCGGA CAGCGCGGCG ACGATCAGCA TCGAGCTGTT CGAGCGCAGC
GGCATCGACA TCTGGCTGTT CACCAATGAC AATTGGTACA TCCGCCGCGA TGACGGCAAA
TATGTCGCCC ACGAGGAGCG CACCATCCGC TTTTCGCCGA CGATGGCCGA GGACCTGACG
CCGTTCGCCG GCAAGGCTTG CAAGATCGTC GGCGTCAGCG CCGACTTCGC GCTGCTGAAG
CGCTGCGAGC CGGAGCTACA GGCCGCGCTC GGTGACCGTG CGCTGGCGGT GCGGTCGCAG
GACTACTATC TCGACGTCAC CCCACCCGGC CGCAGCAAGG GCACGTTCGT CACCGCGATT
GCGGAGCGGC TCGGCATCGC GGCGGACGCG ATCGCCACCA TCGGCGACAT GCAGAACGAC
CTGCCGATGT TCGGCGTCAG CGGCCTGCCG ATCGCAATGG GGAACGCCGC CGACGACATC
AAGCAGCAGG CCGCTCACGT TACCGGCCGC AACGACGACG ACGGCTTCGC CGCCGCGATC
GACTTCATCC TCAAGCACAA CGCGCGTGTC GGCGGTTAG
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| Protein sequence | MTRIQLVISD VDGTLVTTDK RLTDRARDAV SRLEASGVGF TLTSSRPPVG MRMYSDPLGI
TLPLGPFNGS SIVTPTLDVL EQHLIPDSAA TISIELFERS GIDIWLFTND NWYIRRDDGK
YVAHEERTIR FSPTMAEDLT PFAGKACKIV GVSADFALLK RCEPELQAAL GDRALAVRSQ
DYYLDVTPPG RSKGTFVTAI AERLGIAADA IATIGDMQND LPMFGVSGLP IAMGNAADDI
KQQAAHVTGR NDDDGFAAAI DFILKHNARV GG
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