| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4155 |
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| Symbol | |
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| ID | 6411839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4447129 |
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| End bp | 4449981 |
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| Gene Length | 2853 bp |
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| Protein Length | 950 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714037 |
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| Product | bifunctional transaldolase/phosoglucose isomerase |
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| Protein accession | YP_001993126 |
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| Protein GI | 192292521 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0166] Glucose-6-phosphate isomerase
[COG0176] Transaldolase |
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| TIGRFAM ID | [TIGR00876] transaldolase, mycobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCCG TCAAAGCGCT CGAAAAACAC GGCCAGGCGA TCTGGCTGGA TTTCCTGGCC
CGCGGCTTTA TCGCCAAGGG CGACCTGAAG AAACTGATCG AGACCGACGG GGTGAAGGGG
GTGACGTCCA ATCCCTCGAT CTTCGAAAAG GCGATCGGCG CCAGCGACGA ATACGACGGC
GCGATCGGCG AGGCGCTGAA GAAGGGCGAC CGCTCGGTCG GCGATCTCTA CGAGACGCTC
GCAGTCGAAG ACATTCAGAA CGCCGCCGAT GTGCTGCGTC CGGTTTACGA CAAGCTCGAG
CATCGCGACG GCTTCGTCAG CCTCGAAGTC TCGCCGTATC TGGCGCTCGA CACCAAAGGC
ACGCTGGCGG AAGCCGAGCG GCTGTGGCGC GCGGTGAATC GTGAAAACCT GATGATCAAG
GTACCGGCGA CCCGCGAGGG CCTGCCGGCG ATCAAGCAGC TCGTATCCAA GGGCATCAGC
GTCAACGTCA CGCTGCTGTT CTCGCAGAAG GTCTATGTCC AGGTCGCCGA GGCCTACATT
GCCGGTCTGG AAGCGCTGAT CGCCTCTGGC GGCGATCCGG CACATGTCGC CAGCGTCGCC
AGCTTCTTCA TCAGCCGGAT CGACAGCGCG GTGGATGCCG CGCTCGACGA CAAGATCGCC
AAGGCCAACG ATCCGTCCGA AAAAGAGCGG CTGGAGGAAC TGAAGGGCAA GGTCGCGATC
GCCAACGCCA AGCTGGCGTA TCAGGACTAC AAGCGGCTGT TCAGCGGCGA CCGTTGGGCC
AAGCTGGAAG CCTGCGGGGC CAAGCCCCAG CGGCTGTTGT GGGCCTCCAC CGGCACCAAG
AACAAAGCCT ATAGCGACGT GATGTATATC GAGGAGCTGA TCGGTCAAAA CACCGTCAAC
ACGGTGCCGC CGGCGACGCT CGATGCCTTC CGCGATCACG GCGAACCGCG TAACAGCCTG
GAGAAGGACC TCGACGAGGC GCGCGCGGTG ATCAAGGGCC TTGCCAGCAC CGGCGTCTCC
CTTGATGCGA TCACCGACAA GCTGGTCACC GAAGGCGTAC AGCTGTTCGC CGACGCCTTC
GACAAGCTGC TCGGCGCGGT GGCGTTCAAG CGCGAAACCG TGCTGGCCGG CCGGGTTGGA
AAGCAGACGC TATCGCTTAC GGGCGAACTC GCCAACAGCG TGAAGCAGCA CACCGAGGCG
TGGCGCAGCG CCGGCAAGAT CCGCAAGATC TGGTCGCGGG ACGAGTCGGT CTGGACCGAT
CACGACGAAG GCAAATGGCT CGGCTGGCTA CACGCGCCGT CGGTCGCCAA GACCAAGCTC
GTCGAGTATC AGGACTTCGC CAAATGGGTG AAGAGCCAGG GCTTCAGCGA TGCGGTGGTG
CTCGGCATGG GCGGCTCCAG CCTCGGCCCC GAAGTGATCG CCGAGACCTT CCCGCAGCAG
GACGGCTTCC CCAAGCTGCA CGTGCTCGAC TCGACCGATC CGGCCCAGGT GCGCGCGCTC
GAAGCCAGCG TCAAGCTGGC CTCGACGCTG TTCATCGTCT CGTCGAAGTC CGGCGGCACC
ACCGAGCCGA ACGTGATGAA GGCCTACTTC TTCGCGCGCG TCACCGAAGC AATCGGCGCC
GACCAGGCCG GCCGTCACTT CGTTGCGGTC ACCGACCCCG GCTCGTCGAT GGAGAAGGTC
GCGACCGAGC AGAAGTTCGC CAAGATCTTC CACGGCGATC CGACCATCGG CGGACGTTAC
TCGGTGCTGT CGCCGTTCGG CCTGGTGCCG GCGGCCGCGG CAGGTATCGA TCTCGCCAAG
CTGCTGGACT CGGCGCTGGC CATGGTCCGC TCCTGCGGCA CCGACGTGCC GCCGCAGCAG
AATCCCGCGG TGCAGCTCGG TCTGGTGATG GGCTGCGCCG GCCTCGAAGG CCGTGACAAG
GTGACGATCA CCTCGTCGAA GGCGATCGCG GATTTCGGCG CCTGGGCCGA GCAGCTGATC
GCGGAATCGA CCGGCAAGGA AGGCAAGGGC CTGATCCCGA TCGACGGCGA GCCGTTGGCC
GACCCGTCGG CCTACGGCAA CGACCGGCTG TTCATTGACC TGCGCACCGA AGCCGAAACC
GATGCGGCCC ACGAGGCGAA GCTCGCGGCG TTGGAAGCGG CCGGGCACCC GGTGGTGCGG
ATCGTGCTGA AATCCACCGA GGCGATCGGT CAGGAGTTTT TCCGCTTTGA ACTCGCGACC
GCCGTCGCAG GCGCGGTGCT CGGCATCAAC CCGTTCGACC AACCCGACGT CGAAAGCGCC
AAGATCAAGA CCCGCGAACT CACCGCGGCG TTCGAAAAAT CCGGCGCACT GCCGGCGGAG
ACGCCAGCGC TGTCGACCGC CGAGGCCGAT CTCTACACCG ACGCCGGAAA CGCCGCCGCG
CTGCGCAAGG CCGGCGCCGA TGGCACGGTG GCCTCGTGGC TGAAGGCGCA TCTGTCGCGC
GTCAGCGCCG GCGATTACGT CGCCCTGCTC GCTTACATCG AGCGCAACGC GGCGCATATC
GAGGCGCTGC AGGATATTCG GCTGAAGGTT CGCGACCATC GCAAGGTCGC GACCTGCGCC
GAATTCGGCC CGCGCTTCCT GCACTCGACC GGGCAGGCCT ACAAGGGCGG ACCGGACAGC
GGCGTCTTCC TGCAGATCAC CGCCGACGAT GCGGCCGATC TGCCGGTGCC CGGCCAGAGC
GCCAGCTTCG GCGTGATCAA GGCGGCGCAG GCGCGCGGCG ATTTCGACGT CCTCACCGAA
CGCGGCCGCC GCGCCCTGCG GGTTCACCTC AAGGGCGATC TCGGCGCCGG GCTGAAGTCG
CTCGGCACCG CGATCAAGCA AGCGCTGGAG TAG
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| Protein sequence | MNPVKALEKH GQAIWLDFLA RGFIAKGDLK KLIETDGVKG VTSNPSIFEK AIGASDEYDG
AIGEALKKGD RSVGDLYETL AVEDIQNAAD VLRPVYDKLE HRDGFVSLEV SPYLALDTKG
TLAEAERLWR AVNRENLMIK VPATREGLPA IKQLVSKGIS VNVTLLFSQK VYVQVAEAYI
AGLEALIASG GDPAHVASVA SFFISRIDSA VDAALDDKIA KANDPSEKER LEELKGKVAI
ANAKLAYQDY KRLFSGDRWA KLEACGAKPQ RLLWASTGTK NKAYSDVMYI EELIGQNTVN
TVPPATLDAF RDHGEPRNSL EKDLDEARAV IKGLASTGVS LDAITDKLVT EGVQLFADAF
DKLLGAVAFK RETVLAGRVG KQTLSLTGEL ANSVKQHTEA WRSAGKIRKI WSRDESVWTD
HDEGKWLGWL HAPSVAKTKL VEYQDFAKWV KSQGFSDAVV LGMGGSSLGP EVIAETFPQQ
DGFPKLHVLD STDPAQVRAL EASVKLASTL FIVSSKSGGT TEPNVMKAYF FARVTEAIGA
DQAGRHFVAV TDPGSSMEKV ATEQKFAKIF HGDPTIGGRY SVLSPFGLVP AAAAGIDLAK
LLDSALAMVR SCGTDVPPQQ NPAVQLGLVM GCAGLEGRDK VTITSSKAIA DFGAWAEQLI
AESTGKEGKG LIPIDGEPLA DPSAYGNDRL FIDLRTEAET DAAHEAKLAA LEAAGHPVVR
IVLKSTEAIG QEFFRFELAT AVAGAVLGIN PFDQPDVESA KIKTRELTAA FEKSGALPAE
TPALSTAEAD LYTDAGNAAA LRKAGADGTV ASWLKAHLSR VSAGDYVALL AYIERNAAHI
EALQDIRLKV RDHRKVATCA EFGPRFLHST GQAYKGGPDS GVFLQITADD AADLPVPGQS
ASFGVIKAAQ ARGDFDVLTE RGRRALRVHL KGDLGAGLKS LGTAIKQALE
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