| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4149 |
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| Symbol | |
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| ID | 6411833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4442004 |
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| End bp | 4443401 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642714031 |
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| Product | amidase |
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| Protein accession | YP_001993120 |
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| Protein GI | 192292515 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.706387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGACA TCTGGCGCCT TCCCGCGACT GAACTGGCCG ATCTCGTCCG CAGCCGCCGC
GTCTCGGCGC GCGAAGTGGC CGAGGCTGCG CTGCACCGGC TCGATGCCGT CAATCCTGCG
ATCAATGCGG TGGTCGACCA CAAGGCCGAG GACGCGCTGG CGCAGGCCGA TGCGGTCGAC
GCTGCGCTCG CCAAAGGCGA CACGCCCGGT GTGCTCGCCG GCGTGCCGGT GACCGTGAAG
GTCAATGTCG ATCAGCAGGG TTTTGCCACC ACCAACGGTG TGACGCTGCA GCGCGACTGG
ATCGCCAAGA CCAACAATCC GGTGGTCGAC AATCTGCGCA AAGCAGGCGC GGTGATCATC
GGCCGCACCA ACACCCCGGC GTTCTCCTAT CGCTGGTTCA CCTCAAACAA ACTGCACGGC
GAGACGCTGA ACCCGCGCGA TCCCTCGATC ACGCCGGGTG GCTCCTCCGG CGGCGCCGCT
GCCGCGGTCG CGGCCGGGAT CGGCGCGATC GCACACGGCA CCGACATCGC CGGCTCGGTG
CGCTACCCCG CTTATGCCTG CGGCGTGCAC GGGCTGCGGC CGACCATCGG CCGCGTCGCT
GCCTACAATG CGTCGTCGCC GGAGCGGCCG ATCTGCCCGC AGATCAGCGC CGTCTCGGGT
CCGCTTGCGC GGACCATCGC CGACGTGCGG CTCGGGCTGC AGGCGCTGGC GCAGCCGGAC
GCGCGCGATC CGTGGTGGGT GCCGGCCCCG CTTGAAGGTC CGCCGCGCGA CAAGCGCGCC
GCGCTGTGCA TCGCGCCGGA TAATCTTGCG GTGGTGCCGG AGGTTCGCGA TGCGCTGAAT
GACGCCGCAC GGCGTCTCGA AGCCGCCGGC TGGGTCGTCG AGGAGATCGC CAGCACGCCG
CCGCTGCGCG AGGCCGCCGA GCTGCAGGCG CAGTTCTGGC TCGGCGACGG TTATCAGGCG
ATGCTGGACG CGGCCGAGCG CGAGGGCGAC GAAGGCGCGC TGGCATGTCT GCACGGCAAC
CGCGACAAGG CGATCGGCGA TCTCGCCAGC TACTCGAAGC TGATCACCCG CCGCGCCACG
CTAACGCGCG ACTGGCAGAC CTTCTTCGAC ACCTATGCGG TGCTGCTGAT GCCGGTGTGC
GGCGAGCTGC CGTTCCCGCA GCGTCTCGAC CTGAAAGATG ACGAGTCGTT CAAACGGGTG
TGGGCGGCGC AGATGCCGCA GGTCGGCCTG CCGTTCATGG GCCTGCCTTC GCTGACGGTG
TCGACCGGGA TGGTCGGCCG CGTGCCGGTC GGTGTGCAGG TGGTGTCGGG ACGTTATCGC
GAGGATCTGT GCCTGCTCGC GGGTGAAGCG ATCGAGGCCG GCGGCGTGCC GCCGTCGCCG
ATCGATCCGT TGGCTTGA
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| Protein sequence | MQDIWRLPAT ELADLVRSRR VSAREVAEAA LHRLDAVNPA INAVVDHKAE DALAQADAVD
AALAKGDTPG VLAGVPVTVK VNVDQQGFAT TNGVTLQRDW IAKTNNPVVD NLRKAGAVII
GRTNTPAFSY RWFTSNKLHG ETLNPRDPSI TPGGSSGGAA AAVAAGIGAI AHGTDIAGSV
RYPAYACGVH GLRPTIGRVA AYNASSPERP ICPQISAVSG PLARTIADVR LGLQALAQPD
ARDPWWVPAP LEGPPRDKRA ALCIAPDNLA VVPEVRDALN DAARRLEAAG WVVEEIASTP
PLREAAELQA QFWLGDGYQA MLDAAEREGD EGALACLHGN RDKAIGDLAS YSKLITRRAT
LTRDWQTFFD TYAVLLMPVC GELPFPQRLD LKDDESFKRV WAAQMPQVGL PFMGLPSLTV
STGMVGRVPV GVQVVSGRYR EDLCLLAGEA IEAGGVPPSP IDPLA
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