| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4139 |
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| Symbol | |
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| ID | 6411823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4434412 |
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| End bp | 4435455 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642714021 |
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| Product | Vanillate monooxygenase |
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| Protein accession | YP_001993110 |
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| Protein GI | 192292505 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.105569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCCT TTCCGCTCAA CGCCTGGTAT GCGGCGGCCT GGGACGCCGA CATCAAGCAC
GCGCTGTTTC CGCGCACGAT CTGCGGCAAG CATGTCGTGA TGTATCGAAA GGCGGACGGG
AACGTCGCTG CTCTTGAGGA CGCCTGCTGG CATCGCCTGG TGCCTCTGTC GAAAGGCCGG
CTCGAAGGCG ACACCGTCGT CTGCGGTTAT CACGGGCTGA AGTTCAATCC GCAGGGCCGC
TGCACCTACA TGCCGTCGCA GGAGACGATC AATCCGTCGG CCTGCGTGCG CTCCTATCCG
GTGGTCGAGC GGCATCGCTT TGTCTGGCTG TGGATGGGCG ATCCGGTGCT GGCCGATCCG
GCGCTGGTCC CCGACATGCA CTGGAACGAC GATCCGGCCT GGGCCGGCGA CGGCAAGACG
ATCTACGCCA AATGCGACTG GCGCCTCGTC GTCGACAATC TGATGGACCT CACCCACGAG
ACCTATGTAC ACGGCTCGTC GATCGGCAAC GAGGCGGTGG CCGAAGCGCC GTTCGATGTC
ACGCACGGCG ACCGCACCGT CACCGTGACA CGCTGGATGA AGGGCATCGA ACCGCCGCCG
TTCTGGGCCG CGCAGCTCGG CAAGCCCGGC CTGGTCGATC GTTGGCAGAT CATCCGCTTC
GAGGCGCCCG GCACCGTGAC GATCGATGTC GGCGTGGCGC CGGCCGGCAC CGGCGCGCCG
GAAGGCGACC GCTCGCAGGG CGTCAACGGC TTCGTGCTCA ACACCATGAC GCCGGAAACC
GACACCACCT GTCACTACTT CTGGGCTTTC GTGCGCAACT ATCGGCTCAG CGACCAGCGC
CTCACCACCG AGATCCGCGA AGGCGTCTCC GGCATCTTTC GCGAGGACGA AATCATCCTC
GAAGCGCAGC AGCGCGCGAT GCTCGAGAAC CCGGACCGGG TGTTCTACAA TCTCAACATC
GACGCCGGCG CGATGTGGTC GCGCAAGCTG ATCGACCGCA TGGTCGCGCA GGAAAGCGCG
CCAAAGCTGC AGGCGGCGGA GTAA
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| Protein sequence | MPAFPLNAWY AAAWDADIKH ALFPRTICGK HVVMYRKADG NVAALEDACW HRLVPLSKGR
LEGDTVVCGY HGLKFNPQGR CTYMPSQETI NPSACVRSYP VVERHRFVWL WMGDPVLADP
ALVPDMHWND DPAWAGDGKT IYAKCDWRLV VDNLMDLTHE TYVHGSSIGN EAVAEAPFDV
THGDRTVTVT RWMKGIEPPP FWAAQLGKPG LVDRWQIIRF EAPGTVTIDV GVAPAGTGAP
EGDRSQGVNG FVLNTMTPET DTTCHYFWAF VRNYRLSDQR LTTEIREGVS GIFREDEIIL
EAQQRAMLEN PDRVFYNLNI DAGAMWSRKL IDRMVAQESA PKLQAAE
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