| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4134 |
|---|
| Symbol | |
|---|
| ID | 6411818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 4428587 |
|---|
| End bp | 4429003 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642714016 |
|---|
| Product | Rhodanese domain protein |
|---|
| Protein accession | YP_001993105 |
|---|
| Protein GI | 192292500 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0607] Rhodanese-related sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.64767 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCAGA CTATCACCCG CGGCATCAAG GCGATGCTCG ACGAAGCCAA TTCCTCGATC
GAGACGCTGA CGACCGCGGA CGCGATCGCG TTGCACAAGT CCGGCGCCAG CGACGTGGTG
ATCGTCGACA TCCGCGATCC GCGCGAGATC GAGCGCGACG GCAAGATCCC GGGCTCGTTC
TCCTGCACCC GCGGCATGTT GGAATTCTGG ATCGATCCGC AGAGCCCCTA CGCCAAGCCG
ATCTTCCAGG AAGACAAGAA GTTCGTGTTC TATTGCGCCG GTGGCTTGCG TTCGGCGCTC
GCCGCCAAGA CCGCGCACGA CATGGGACTG AAGCCGGTCG CCCACATCGA GGGCGGTTTC
GGCGCCTGGC GCGATGCCGG CGGCCCGATC GAAGCCTGGG TGCCGAAGAA AAAGTGA
|
|---|
| Protein sequence | MPQTITRGIK AMLDEANSSI ETLTTADAIA LHKSGASDVV IVDIRDPREI ERDGKIPGSF
SCTRGMLEFW IDPQSPYAKP IFQEDKKFVF YCAGGLRSAL AAKTAHDMGL KPVAHIEGGF
GAWRDAGGPI EAWVPKKK
|
|---|
| |