| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4125 |
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| Symbol | |
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| ID | 6411809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4420358 |
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| End bp | 4420948 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642714007 |
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| Product | hypothetical protein |
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| Protein accession | YP_001993096 |
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| Protein GI | 192292491 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2862] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00645] conserved hypothetical transmembrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.373564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGATGA CACCCGAGAC GCCGCTGCCG CCGAAAGGAC TGGGGCTGCG GCCGATCCCC
ATGCTGATCT TCGGTTCGCG CTGGCTGCAA TTGCCGCTGT ATGTCGGCCT GATCGTCGCG
CAGGGCATCT ACGTCGTGCT GTTCCTGAAG GAGCTGTGGC ATCTGTTCCA GCACTCCTTC
GACTTCAGCG AGCAGCAGAT CATGCTGGCG GTGCTGGGGC TGATCGACGT GGTGATGATC
TCGAACCTCC TGGTGATGGT GATCGTCGGC GGCTACGAGA CCTTCGTGTC GCGGCTCAAC
CTGCGGGGCC ACCCCGACGA GCCGGAATGG CTCAGCCACG TCAATGCCAG CGTGCTGAAG
ATCAAGCTGG CAATGGCGAT CATCGGCATC TCGTCGATCC ATCTGCTGCG GACCTTCATC
GAAGCCGGCA ACCTCGGCGC GGCCGGCAAA GTGGGCGGCT ACACCGAGAC CGGTGTGATG
TGGCAGACCA TCATCCACAC CGTGTTCATC CTGTCGGCGA TCGGCATCGC CTGGGTGGAC
CGGATCTCGA ATCTGGCAAC CGAAGAAGCC AAGGCGCACG CCGGACATTG A
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| Protein sequence | MSMTPETPLP PKGLGLRPIP MLIFGSRWLQ LPLYVGLIVA QGIYVVLFLK ELWHLFQHSF
DFSEQQIMLA VLGLIDVVMI SNLLVMVIVG GYETFVSRLN LRGHPDEPEW LSHVNASVLK
IKLAMAIIGI SSIHLLRTFI EAGNLGAAGK VGGYTETGVM WQTIIHTVFI LSAIGIAWVD
RISNLATEEA KAHAGH
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