| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4124 |
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| Symbol | |
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| ID | 6411808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4419114 |
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| End bp | 4420358 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642714006 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001993095 |
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| Protein GI | 192292490 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.215257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCTAA CGCATGCGGT CGCTCTCGCG GTCGGCGTCA CCGTAGCGGT TTCGGTGGCG
TTCGGCGCGA GCGTGGCTCG CGCCGCCGAT CCCGGCTTCA CCCGCTTCGT CGCCGAGCTG
TGGCCGGAGG CGCGCGAGGC CGGCGTGTCG CGGACCACGT TCGATGCGGT CACCGCCGGA
CTCGCACCCG ACTACAAGCT GCCCGATCTG ATCCTGCCGG GCCGGCCGAA GACCGGGGCG
CCACGGCAGG CTGAATTCGT CCAGGTCCCG GCGGACTATC TGAAGGAAGC GCGGATCGAG
AGTCTCGCCG CGCATGGCCG CACGTTGATG CAGCGCTATC GGCCGACGCT GGATGCGATC
GAGCGCAAGT TCGGCGTGCC GGCGACTGTG GTGCTGGCGA TCTGGGGCCG GGAAACCGAT
TACGGCCGCT ACAAGCTGCC CTACGACGCA GTCCGAGTGA TGGCGACGCA GGCCTATGTC
GGTCGCCGCA AGGACCAGTA TCGAACCGAA TTCATCCTGG CGATGAAGAT CATCGGTGAG
GGCGCGGTGA CGCGGCAGGA AATGCGTTCG TCCTGGGCCG GCGCCACCGG GCTGACGCAG
TTTCTGCCGT CCGAGTACTA CAAGCACGGC GTCGATTTCG ACGGCGACGG CCGCGTCGAC
ATCTGGCACT CGGTGCCGGA CGCTCTGGCG TCGGCCGCTC AGCAGCTCGT CAACAAGGGC
TGGCAGAGCG GATTGCGCTG GGCCTACGAG GTGAAGGCGC CGACGCGAGC CGACTGCACC
GAAGGCGTGC CGGAAGTCAC CAAGCCGATC GGGCAGTGGC TGCGTGAGGG CTTCACGCTC
GCCCGGCCGG ATCGGCTGAG TGCGGCGGAG CGCGAGCAGC CGGCGTCATT GCTGCAGCCT
GAAGGCATCT ACGGTCCGGC GTTCCTGACC ACGAAGAACT ACTTCGTCAT CAAGGAATAC
AATTTCTCGG ATCTCTACGT GCTGTTCGTC GGCCATCTCG CCGACCGGAT GACAGATCCG
CGCCCGTTCG CCACGCCGTG GTCGGCCACC AAGCAGCTTC GCACCACCGA CGTCGAGGCG
ATGCAGCGCG GACTGGAGCG GCTCGGCATC TATCGCGACA AGATCGACGG CAAGGCCGGG
ATGCTGACCC GTGCGGCGCT CGGCGCCTAC CAGAAGCGCG CCGGACTGCA GGTCGATTGC
TGGCCGAGCG AAGCGGTGCT TCGATCGATC CAGGCGGCGC GCTGA
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| Protein sequence | MRLTHAVALA VGVTVAVSVA FGASVARAAD PGFTRFVAEL WPEAREAGVS RTTFDAVTAG
LAPDYKLPDL ILPGRPKTGA PRQAEFVQVP ADYLKEARIE SLAAHGRTLM QRYRPTLDAI
ERKFGVPATV VLAIWGRETD YGRYKLPYDA VRVMATQAYV GRRKDQYRTE FILAMKIIGE
GAVTRQEMRS SWAGATGLTQ FLPSEYYKHG VDFDGDGRVD IWHSVPDALA SAAQQLVNKG
WQSGLRWAYE VKAPTRADCT EGVPEVTKPI GQWLREGFTL ARPDRLSAAE REQPASLLQP
EGIYGPAFLT TKNYFVIKEY NFSDLYVLFV GHLADRMTDP RPFATPWSAT KQLRTTDVEA
MQRGLERLGI YRDKIDGKAG MLTRAALGAY QKRAGLQVDC WPSEAVLRSI QAAR
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