| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4117 |
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| Symbol | |
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| ID | 6411801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4412605 |
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| End bp | 4414185 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642713999 |
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| Product | Protein of unknown function DUF1800 |
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| Protein accession | YP_001993088 |
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| Protein GI | 192292483 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5267] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.970573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAACCA ACACGGCCGG ACGGTGGAGC GCACGAGGAT CGGCGATACT GGCGATCGGC
ATCGCCGCAA TCGTCACCGG CGGATCGGCC GGGGCCGCGG AGATCTCGGC GCACGATCTG
GCGCTGATCG ATCGGCTGAC CTGGGGCATC AACGGATCCA GCGTGGCGCA ATTCCAGAAA
CTCGGCGCCG CGCGCTGGGT GGACCAACAG CTGCACCCCA CGGCGGACAG TGCGCTGCCG
CAGCTGGTCG TTGCGCAGAT CGACGCGATG CCCGACGCCG CCGGCCTGAC GCCGGCGGCG
ATCAATGCGT TTCAGGCGCA GGGCAAGGAT GCCGATCAAC TCACTGACCC GGAGGCGCGC
AAGACAGCCA AGCAGGCGTA CCAGCAGGCG CTGAACGACC GCGCCAAGCA GGCGGCAACC
CGGTCGATCC TGCGCGCGCT CTATGCGCCC GATCAGCTCC GCGAGCGGAT GAGCTGGTTC
TGGCTGAACC ATTTCAACGT CCACCAGAGC AAGGCCGAGC TGCGCCTCCT GGTCGGCGAC
TATGAGGATC GCGCGATCCG CGCGCATGCG CTCGGCAAGT TCGGCGATCT GTTACGCGCC
ACGCTGCGGC ACCCGGCGAT GCTGCGCTAT CTCGACAATG CCGGCAACGC CAACGGCCAT
CTCAACGAGA ACTACGCCCG CGAGATCATG GAGCTGCACA CCATGGGCGT CGGCAGTGGC
TACACCCAGG CCGATGTGGA GTCGCTCGCC AAGATCCTCA CCGGCGTCGG CATCGACCTG
AAGCCCGAGG ACCCGAAGCT GAAGCCTGCG CTGGCTCCGC AGCTCGTCCG CGACGGCGCG
TTTGAGTTCA ACCCGGCGCG GCACGATTAC TCCGACAAAA CCTTCCTCGG CCACACCATC
CGCGGCAGCG GCTTTGCCGA AGTCGACGAG GCGCTCGACC TGATCGTGCA CAATCCGGCG
ACCGCGCAGC ACGTCTCGCG CAAGATCGCG ACCTACTTCG TCTCGGACGA GCCGCCGCAA
CCGCTGATCG ACAAGATGGC GAAAACCTTC ACCGCCTCCG ACGGTGATAT CGCGCAGGTG
CTGGCCACGA TGATCGCCGC GCCGGAGTTC GATGCGTCGC TGAAGACGGC GGAACGCTTC
AAGGATCCGG TTGGCTACGT CTATTCGGCG GTGCGGCTCG CTTACGACGA CAAGGTCGTG
CTCAACACCG TGCCGATCCA GCGTTGGCTC GGCCGGCTCG GCGAAGGGCT GTATCAGCGC
CAGACGCCGG ACGGCTATCC ACTGACGGCG AGCGCCTGGA ACGGCCCCGG CCAGATGATG
CTGCGGTTCG AGATTGCGCG TCAGATCGGT TCCGGTTCGG CCGGGTTGTT CAAGCCGGAG
CAGGCCGACG CCAAGGATCG GCCCGCATTT CCGCTGCTGC AGAACGCGCT GTATTTCGGC
GGGCTCAGCC GGACGCTGAG CTCGACCACG CGCGGCGCGC TCGATCAGGC GATCTCACCG
CAGGATTGGA ATACGCTGTT TCTGTCCTCG CCCGAATTCA TGGTTCGTCA ACGCGCGGAG
GCACCGCATG AACCGTCGTG A
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| Protein sequence | MRTNTAGRWS ARGSAILAIG IAAIVTGGSA GAAEISAHDL ALIDRLTWGI NGSSVAQFQK
LGAARWVDQQ LHPTADSALP QLVVAQIDAM PDAAGLTPAA INAFQAQGKD ADQLTDPEAR
KTAKQAYQQA LNDRAKQAAT RSILRALYAP DQLRERMSWF WLNHFNVHQS KAELRLLVGD
YEDRAIRAHA LGKFGDLLRA TLRHPAMLRY LDNAGNANGH LNENYAREIM ELHTMGVGSG
YTQADVESLA KILTGVGIDL KPEDPKLKPA LAPQLVRDGA FEFNPARHDY SDKTFLGHTI
RGSGFAEVDE ALDLIVHNPA TAQHVSRKIA TYFVSDEPPQ PLIDKMAKTF TASDGDIAQV
LATMIAAPEF DASLKTAERF KDPVGYVYSA VRLAYDDKVV LNTVPIQRWL GRLGEGLYQR
QTPDGYPLTA SAWNGPGQMM LRFEIARQIG SGSAGLFKPE QADAKDRPAF PLLQNALYFG
GLSRTLSSTT RGALDQAISP QDWNTLFLSS PEFMVRQRAE APHEPS
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