| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4116 |
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| Symbol | |
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| ID | 6411800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4411413 |
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| End bp | 4412618 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642713998 |
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| Product | protein of unknown function DUF1501 |
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| Protein accession | YP_001993087 |
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| Protein GI | 192292482 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4102] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGTC GTGATCTGCT GAAAGCCGTC GCGGCCCTCG CACCGGCCGC ACTGACGACC
ACGATCGCCG GTCGCGTCTG GGCCACGCCG GCCACCGACG CCAAGCTTCT GGTGGTGTTC
CTGCGCGGCG CTTACGACGC GGCCAACGTG CTGGTGCCGG TGTCGAGCAG CTTCTACTAC
GAGTCACGGC CGAACCTCGC GATTGCCAAG CCGGACGTCG GCAACCCCAA TGCGGCGGTC
GCGCTCGACG CCGATTGGGG CCTGCACCCG GCGCTGCGCG ACAGCTTGGC GCCGCTATGG
ACGAGCCGCG AGATCGCATT CGTGCCGTTC GCCGGCACCA GCGACGACAC CACCCGCAGT
CACTTCGAGA CGCAGGACAC GATCGAACTC GGGCAATCGA CCAAAGGCTC GCGCGACTAT
CGCTCCGGCT TCATGAGCCG GCTTGCGGCG GAATTGACGC GGGTGAAACC GATCGCCTTC
ACCGAGCAGC TGCCGCTGAT TTTCCGCGGC CAGGCGGAGA TTCCGAATAT TGCACTCGGC
AATGTCGGCA AGCCCGGCGT CGATGACCGC CAGGCCGAGC TGATCAAGCA GATGTACGCC
AAGACCAAAC TCGCATCCGC GGTGGCAGAA GGCTTTCGGG TGCGCGACGA GGTGGTGAAA
TCGATTGCCG ACGAAATGAC TGCAGCGAAC CGCGGTGCGG TGTCGCCGCG CGGCTTCGAG
CTGTCGGCGC GCCGGATCGG CCGGCTGATG CGCGAGCAGT TCAACCTCGG CTTCGTCGAT
GTCGGCGGCT GGGACACCCA CGTCAATCAG GGCGCGGCGA CTGGTTATCT CGCTGACCGG
CTCGGCGAGC TCGGCCGCGC GCTCGCCGGA TTCCGCGAAG AGATCGGGCC GGCGGCGTGG
CGCGACAGCG TGGTGGTGGT GATCTCCGAA TTCGGCCGGA CGTTCCGCGA GAACGGCGAC
CGCGGCACCG ATCACGGCCA TGGCAGCGTT TACTGGGTGC TCGGCGGCGG GCTCAACGGC
GGCCGCATTG CCGGCGAGCA GATCACGGTG GCGCAGCCGT CGCTATTCGA GAACCGTGAT
TATCCGGTGC TGACCGATTA TCGCGCGCTG TTCGCGGGTC TGGTGCAGCG GATGTACGGG
CTCGATGCTG CGGCGCTGCA ACGGATCTTC GCCGACGTGC GTCCGGCTGA TCTCGGCCTG
GTGTGA
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| Protein sequence | MNRRDLLKAV AALAPAALTT TIAGRVWATP ATDAKLLVVF LRGAYDAANV LVPVSSSFYY
ESRPNLAIAK PDVGNPNAAV ALDADWGLHP ALRDSLAPLW TSREIAFVPF AGTSDDTTRS
HFETQDTIEL GQSTKGSRDY RSGFMSRLAA ELTRVKPIAF TEQLPLIFRG QAEIPNIALG
NVGKPGVDDR QAELIKQMYA KTKLASAVAE GFRVRDEVVK SIADEMTAAN RGAVSPRGFE
LSARRIGRLM REQFNLGFVD VGGWDTHVNQ GAATGYLADR LGELGRALAG FREEIGPAAW
RDSVVVVISE FGRTFRENGD RGTDHGHGSV YWVLGGGLNG GRIAGEQITV AQPSLFENRD
YPVLTDYRAL FAGLVQRMYG LDAAALQRIF ADVRPADLGL V
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