Gene Rpal_4101 details

Gene Information

• Locus tag: Rpal_4101
• ID: 6411785
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: -
• Start bp: 4399957
• End bp: 4400487
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642713983
• Product: hypothetical protein
• Protein accession: YP_001993072
• Protein GI: 192292467

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.00485974
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGACA TAGACGACGC GCCAAACCAG CCACGTTCCC GTCTGTCGGC TCCCGTTCCT 
CTGACGATGG AACATGATTT GTCGGCGTTC GATTGCGGCG AACCGGTGTT GAACGACTGG 
CTGCGCCAAC GGGCACTCAA GAACGAAAGC CGCTTCTCGC GCACCTATGT GGTGTGCGAG 
GGCCACCAGG TCGTCGGCTA TTTCTGCGTT TCAGCAGGCG CGATCGAGCG CGCGGCAGCG 
CCGGGCAAGG TCCGCCGCAA CGCGCCCGAC ACGATCCGGG TGTCGGTCAT CGGACGACTG 
GCCGTCAGCC GCTCCCATGC CGGAATAGGT CTCGGCGCCG ACCTGCTTTC GGACGCGCTA 
CGCCGGATCG CGCTGGCGTC GCAGAGCATC GGCATCGGCG CGGTTCTGGT TCACGCCAAG 
GACGATGCGG CCAAACGCTT CTATCTGCGC TGCGCCGAAT TCATCGAGTA TCCCGAAGAC 
AGTCGGACGC TGTTCCTGCC GATCGAAACG GTGGTCGCGG CCTTTAGTTA G 

 

Protein sequence

MADIDDAPNQ PRSRLSAPVP LTMEHDLSAF DCGEPVLNDW LRQRALKNES RFSRTYVVCE 
GHQVVGYFCV SAGAIERAAA PGKVRRNAPD TIRVSVIGRL AVSRSHAGIG LGADLLSDAL 
RRIALASQSI GIGAVLVHAK DDAAKRFYLR CAEFIEYPED SRTLFLPIET VVAAFS