Gene Rpal_4080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4080 
SymbolarsM 
ID6411764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4378858 
End bp4379709 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content70% 
IMG OID642713962 
Productarsenite S-adenosylmethyltransferase 
Protein accessionYP_001993051 
Protein GI192292446 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.214239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACTG ACATGCAAGA CGTGAAGGAC ATCGTCCGCG AGAAATACGC CAGCGCCGCG 
CTGAAGGTCG CCACCGGCGG CGCCTCGTGC TGCGGATCGT CGGCACTGCC CGGCGCCAGC
CCGATCACCA GCAATCTCTA CGACGCGGCG CAGGAACAGG GCCTGCCCGC CGAGGCGATG
CTGGCATCGC TCGGCTGCGG CAACCCGACC GCACTGGCGC AGCTGTCGCC GGGCGAGACC
GTGCTCGATC TCGGCTCCGG CGGCGGCATC GACGTGCTGC TGTCGGCGCG CCGGGTCGGC
CCGACCGGCA AAGCCTACGG CCTCGACATG ACCGACGAGA TGCTGGCGCT GGCGCGCGAC
AACCAGCGCA AGGCCGGCCT CGACAACGTC GAATTCCTCA AGGGCGAGAT CGAGGCGATC
CCGCTGCCCG ACCATTCGGT CGACGTGATC ATCTCGAACT GCGTCATCAA CCTCTCGGGC
GACAAGGACC GGGTGCTGCG CGAGGCGTTC CGGGTGCTGA AGCCGGGCGG GCGGTTCGCG
GTGTCGGACG TGGTGACTCG CGGCGAGATT CCGGAAGCGC TGCGCCGTGA CGTGCTGCTG
TGGGTCGGCT GCCTCGCCGG CGCGCTCGAC GAGGCTGACT ACGTTGCCCG GCTGGCCGCC
GCGGGCTTCG CGCAGATCTC GATCGAGCCG ACCCGCGTGT ACGACATCGA GGACGCCCGC
GAATTCCTCA CCGGCAAGGG CATCGACGTC GACGCCCTCG CCCCGCAAAT GCAGGACAAA
TTCTTCAGCG GCTTCGTCCG TGCCACCAAG CCCGGCGCGG ACGGCGAGGC GCCAGCGCGC
TGCTGCGGGT GA
 
Protein sequence
MPTDMQDVKD IVREKYASAA LKVATGGASC CGSSALPGAS PITSNLYDAA QEQGLPAEAM 
LASLGCGNPT ALAQLSPGET VLDLGSGGGI DVLLSARRVG PTGKAYGLDM TDEMLALARD
NQRKAGLDNV EFLKGEIEAI PLPDHSVDVI ISNCVINLSG DKDRVLREAF RVLKPGGRFA
VSDVVTRGEI PEALRRDVLL WVGCLAGALD EADYVARLAA AGFAQISIEP TRVYDIEDAR
EFLTGKGIDV DALAPQMQDK FFSGFVRATK PGADGEAPAR CCG