| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4078 |
|---|
| Symbol | |
|---|
| ID | 6411762 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 4377489 |
|---|
| End bp | 4378274 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642713960 |
|---|
| Product | protein of unknown function DUF81 |
|---|
| Protein accession | YP_001993049 |
|---|
| Protein GI | 192292444 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.20438 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGCA GATTGACGGG CGCGTTCGGC GGCGGTGCCT TGATCGGTAC ACTTGGTGGA
CTGATCGGCC TCGGCGGCGC AGAGTTTCGC CTTCCGCTGC TGATCAGCAG CTTCCGCTTC
GTCGCGCTTC AGGCAGTCAT TCTCAACAAA GCGATGAGTC TGATCGTGGT CGCGACCGCC
CTGATATTCC GCACGCGCAC GGTGCCACTC GACGATCTGG CGGCGCACTG GACCGTCGTG
GTCAACCTGC TGGGCGGAAG CCTGATCGGG GCATGGTTCG GCGCCGGCTG GGCGACGCGC
CTGAAATCGG CGTCGCTGTA TCGGGTCATC GCCATCCTGT TGGTCGTGAT CGCTCTGGTT
CTGCTGTGGG GGCACGGCGC CGCCGGATCG CAACCGGTTC TCAGCGGCAC CAGCCAGATC
ATCGCGGGTG TCGTGGCCGG GTTCGCAATC GGTGTGGTGG CTTCGCTGCT GGGTGTCGCC
GGAGGTGAAC TGCTGATTCC GACCCTGGTG CTACTGTTCG GCGCCGATAT CAAACTGGCG
GGCAGCCTGT CGCTCGCGGT CAGCCTGCCC ACCATGATCG TCGGCTTCAC ACGCTACAGC
CGGGACCAGA GCTTCTCGGT GATGGATGAG AATCGCTCGT TCGTCCTGGT CATGGCGGCG
GGCTCGATCG TAGGCAGCCT GATCGGCAGC CTGCTGCTCG GCGTCGTCCC GGGAGCCGCC
CTGCTTCCGT TCTTGGCGGC TCTGCTGGTG CTCTCCGCCA TCAAGGTGTG GCGCCACGCT
GATTAG
|
|---|
| Protein sequence | MIGRLTGAFG GGALIGTLGG LIGLGGAEFR LPLLISSFRF VALQAVILNK AMSLIVVATA
LIFRTRTVPL DDLAAHWTVV VNLLGGSLIG AWFGAGWATR LKSASLYRVI AILLVVIALV
LLWGHGAAGS QPVLSGTSQI IAGVVAGFAI GVVASLLGVA GGELLIPTLV LLFGADIKLA
GSLSLAVSLP TMIVGFTRYS RDQSFSVMDE NRSFVLVMAA GSIVGSLIGS LLLGVVPGAA
LLPFLAALLV LSAIKVWRHA D
|
|---|
| |