Gene Rpal_4073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4073 
Symbol 
ID6411757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4374799 
End bp4375326 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content68% 
IMG OID642713955 
Productprotein tyrosine phosphatase 
Protein accessionYP_001993044 
Protein GI192292439 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00713797 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGATC GCATCTTCAA CGTGCTGTTT CTCTGCACCG GCAACACCGC CCGCTCGATC 
ATGGCCGAGA GCATTCTGCG CAAGGACGGC GGCGGCCGTT TCCATGCGTT CTCGGCCGGC
AGCCAGCCGA AAGGCGTCGT CAATCCGTTC GCGCTGAAAG TGCTGGCGGA CGGCAACTAT
CCGACCGAGG GGCTGCGCTC CAAGAGCTGG CAGGAGTTCG CCGCCGCCGA CGCTCCGGTG
ATGGATTTCG TGTTCACCGT CTGCGACAAC GCCGCCGGCG AGGCCTGCCC GGTGTGGCCC
GGCCAGCCGA TGACGGCGCA TTGGGGCATC GACGATCCCG CCGCGGTCGA GGGGAGCGAT
CTCGACAAGG AACGCGCCTT CGTCCAGGCG TTCCGCTTCC TGAAGAACCG GATCGACGCC
TTCACCGCGC TGCCGATCAA GATGCTCGAC GGCGTCGCGC TCGGCGCGAA GCTGCGCGAG
ATCGGCCAGG CCGACGGCGC CAGCCACCGC CGGCCCGAGG TCGCGTGA
 
Protein sequence
MSDRIFNVLF LCTGNTARSI MAESILRKDG GGRFHAFSAG SQPKGVVNPF ALKVLADGNY 
PTEGLRSKSW QEFAAADAPV MDFVFTVCDN AAGEACPVWP GQPMTAHWGI DDPAAVEGSD
LDKERAFVQA FRFLKNRIDA FTALPIKMLD GVALGAKLRE IGQADGASHR RPEVA