Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_4073 |
Symbol | |
ID | 6411757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 4374799 |
End bp | 4375326 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642713955 |
Product | protein tyrosine phosphatase |
Protein accession | YP_001993044 |
Protein GI | 192292439 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00713797 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTGATC GCATCTTCAA CGTGCTGTTT CTCTGCACCG GCAACACCGC CCGCTCGATC ATGGCCGAGA GCATTCTGCG CAAGGACGGC GGCGGCCGTT TCCATGCGTT CTCGGCCGGC AGCCAGCCGA AAGGCGTCGT CAATCCGTTC GCGCTGAAAG TGCTGGCGGA CGGCAACTAT CCGACCGAGG GGCTGCGCTC CAAGAGCTGG CAGGAGTTCG CCGCCGCCGA CGCTCCGGTG ATGGATTTCG TGTTCACCGT CTGCGACAAC GCCGCCGGCG AGGCCTGCCC GGTGTGGCCC GGCCAGCCGA TGACGGCGCA TTGGGGCATC GACGATCCCG CCGCGGTCGA GGGGAGCGAT CTCGACAAGG AACGCGCCTT CGTCCAGGCG TTCCGCTTCC TGAAGAACCG GATCGACGCC TTCACCGCGC TGCCGATCAA GATGCTCGAC GGCGTCGCGC TCGGCGCGAA GCTGCGCGAG ATCGGCCAGG CCGACGGCGC CAGCCACCGC CGGCCCGAGG TCGCGTGA
|
Protein sequence | MSDRIFNVLF LCTGNTARSI MAESILRKDG GGRFHAFSAG SQPKGVVNPF ALKVLADGNY PTEGLRSKSW QEFAAADAPV MDFVFTVCDN AAGEACPVWP GQPMTAHWGI DDPAAVEGSD LDKERAFVQA FRFLKNRIDA FTALPIKMLD GVALGAKLRE IGQADGASHR RPEVA
|
| |